| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_1039 |
|---|
| Symbol | |
|---|
| ID | 6131383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 1154219 |
|---|
| End bp | 1155292 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 641641332 |
|---|
| Product | uroporphyrinogen decarboxylase |
|---|
| Protein accession | YP_001768004 |
|---|
| Protein GI | 170739349 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
|---|
| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGAGA GCGAGCGCGA GGCGCGGCCG GTCCTGCGGG TTCTGAGCGG CGAGAGCCTG
TCCCCTCCTC CGGCCTGGAT GATGCGGCAG GCGGGCCGCT ACCTGCCGGA ATACCGGGAG
CTGCGGGCGA AGGCCGGCTC CTTCCTCGAC CTCTGCTACA CGCCGGATTT CGCCACCGAG
GTCACGCTGC AGCCGATCCG CCGCTTCGGC TTCGAGGCGG CGATCCTGTT CTCCGACATC
CTGGTGGTGC CCCACGCCCT CGGCCAGGGC GTGCGCTTCG TCGAGGGCGA GGGGCCGCGC
CTCGACGCGC TCGAGGACCC GGCGGCGTTC GGGACCCTGC GCGGGGCCGG CGACGCGCGG
GTGATGGACC ACCTCGCCCC GGTCTTCGAG ACGGTGAGCC GCCTGCGCGC GGCGCTGCCC
CGCGAGACCA CCCTGCTCGG CTTCTGCGGC GCGCCCTGGA CGGTGGCGAG CTACATGATC
GGCGGGCGCG GCACCCCCGA CCTCGCCCCG GCCCGCGCCC TGGCGGCCCG GGATCCGGCG
CTCCTCGACG GGCTGATCGA GCGGCTCGTC GCGGTCTCGA CCGAGTACCT CGCCCGCCAG
ATCGAGGCGG GGGCGGACGC CGTGCAGATC TTCGAGAGCC ACGGCGGCAC CCTGCCGGGG
ATGCCGGAGG GCGAGGCCGG CGACGCGCTC ACCCGCTGGA GCCTCGGGCC GATCGCCCGG
ATCGTCGCCG GCCTGCGGGC GCGGGTGCCG GGGGCGCGCG TCATCGTCTT CCCGCGCGGC
ACCGGCCTCG ACGGCCATGC CCGGACGCTC GCCGCGACCG GCGCCGACGC GGTCGGGGTC
GACTGGGACG TGGACCTCGC TGCCCTGCGC GGGCGGCTGC CGGGGCGCGC CGTCACCCAG
GGCAACCTGC ATCCCCACAC GCTGATCGCG GGCGGGGCGG CGCTCGACGC GGCGGTCGAC
GCGATCCTCG CCGCGACCGC GGGCCTGCCC CACATCTTCA ATCTCGGCCA CGGCATCACG
CCGGAGACGC CGATCGCCCA TGTCGAGCGC ATGCTCGCGC GGCTGCGGCG CTGA
|
|---|
| Protein sequence | MGESEREARP VLRVLSGESL SPPPAWMMRQ AGRYLPEYRE LRAKAGSFLD LCYTPDFATE
VTLQPIRRFG FEAAILFSDI LVVPHALGQG VRFVEGEGPR LDALEDPAAF GTLRGAGDAR
VMDHLAPVFE TVSRLRAALP RETTLLGFCG APWTVASYMI GGRGTPDLAP ARALAARDPA
LLDGLIERLV AVSTEYLARQ IEAGADAVQI FESHGGTLPG MPEGEAGDAL TRWSLGPIAR
IVAGLRARVP GARVIVFPRG TGLDGHARTL AATGADAVGV DWDVDLAALR GRLPGRAVTQ
GNLHPHTLIA GGAALDAAVD AILAATAGLP HIFNLGHGIT PETPIAHVER MLARLRR
|
|---|
| |