Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_0580 |
Symbol | |
ID | 6131257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 683487 |
End bp | 684161 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641640901 |
Product | OmpW family protein |
Protein accession | YP_001767576 |
Protein GI | 170738921 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00513133 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCAAGC GGATCCTCGC CGCCGTAGCG GCCGTCCTCG CCGCGACCAC GGCCCAGGCG GCGGACCTTC CCTCCACGGC CGCCCCGCCC CCCGTTCCCG ACCTCGCGCT CTGGTCGCCC TGGATGCTGC GCCTGCGGGC CCTGGCGGTG GTGCCGGATC CGGGCGCGCG CCTCTCGGCG CGCGGCGCGC CGATCGTGGG CGCCGGCGTC GCGGTCACGG ATTCGGTGAT CCCCGAACTC GACATCTCCT ACTTCTTCAC CAAGAACATC GCCACCGAGC TGATCCTGGG CGTGACCCGT CACGGCGTCC GCGGCACCGG CGCCCTCGCC GGGACGCGCA TCGGCAGCAC CTGGATCCTG CCGCCGACCC TCACGCTGCA GTACCACTTC ACCGATTTCG GGCCGTTCAA GCCCTATATC GGCGCCGGTG TGAACTACTC GGTGTTCTTC GGCGAGCAGG AGCGCCTCGG CTTCACCAGC TTCAAGCTCT CGAACAGCGT GGCGCCCGCC GTCCAGTTCG GCTTCGACTA CATGCTGGAC GCGCATTGGG GCATCAACGT CGACGTGAAG AAGGTGTTTC TCGACACCCA CGTCAAGCTG AGCCCGGGCC TGATCCGCGG CCGGGTGGAC CTCGACCCGT GGATCGTGGG CGCCGGCGTG ACCTATCGGT TCTGA
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Protein sequence | MSKRILAAVA AVLAATTAQA ADLPSTAAPP PVPDLALWSP WMLRLRALAV VPDPGARLSA RGAPIVGAGV AVTDSVIPEL DISYFFTKNI ATELILGVTR HGVRGTGALA GTRIGSTWIL PPTLTLQYHF TDFGPFKPYI GAGVNYSVFF GEQERLGFTS FKLSNSVAPA VQFGFDYMLD AHWGINVDVK KVFLDTHVKL SPGLIRGRVD LDPWIVGAGV TYRF
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