Gene M446_0580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0580 
Symbol 
ID6131257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp683487 
End bp684161 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content69% 
IMG OID641640901 
ProductOmpW family protein 
Protein accessionYP_001767576 
Protein GI170738921 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00513133 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCAAGC GGATCCTCGC CGCCGTAGCG GCCGTCCTCG CCGCGACCAC GGCCCAGGCG 
GCGGACCTTC CCTCCACGGC CGCCCCGCCC CCCGTTCCCG ACCTCGCGCT CTGGTCGCCC
TGGATGCTGC GCCTGCGGGC CCTGGCGGTG GTGCCGGATC CGGGCGCGCG CCTCTCGGCG
CGCGGCGCGC CGATCGTGGG CGCCGGCGTC GCGGTCACGG ATTCGGTGAT CCCCGAACTC
GACATCTCCT ACTTCTTCAC CAAGAACATC GCCACCGAGC TGATCCTGGG CGTGACCCGT
CACGGCGTCC GCGGCACCGG CGCCCTCGCC GGGACGCGCA TCGGCAGCAC CTGGATCCTG
CCGCCGACCC TCACGCTGCA GTACCACTTC ACCGATTTCG GGCCGTTCAA GCCCTATATC
GGCGCCGGTG TGAACTACTC GGTGTTCTTC GGCGAGCAGG AGCGCCTCGG CTTCACCAGC
TTCAAGCTCT CGAACAGCGT GGCGCCCGCC GTCCAGTTCG GCTTCGACTA CATGCTGGAC
GCGCATTGGG GCATCAACGT CGACGTGAAG AAGGTGTTTC TCGACACCCA CGTCAAGCTG
AGCCCGGGCC TGATCCGCGG CCGGGTGGAC CTCGACCCGT GGATCGTGGG CGCCGGCGTG
ACCTATCGGT TCTGA
 
Protein sequence
MSKRILAAVA AVLAATTAQA ADLPSTAAPP PVPDLALWSP WMLRLRALAV VPDPGARLSA 
RGAPIVGAGV AVTDSVIPEL DISYFFTKNI ATELILGVTR HGVRGTGALA GTRIGSTWIL
PPTLTLQYHF TDFGPFKPYI GAGVNYSVFF GEQERLGFTS FKLSNSVAPA VQFGFDYMLD
AHWGINVDVK KVFLDTHVKL SPGLIRGRVD LDPWIVGAGV TYRF