Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_0517 |
Symbol | |
ID | 6129216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 615084 |
End bp | 616298 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 641640839 |
Product | major facilitator transporter |
Protein accession | YP_001767514 |
Protein GI | 170738859 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.159005 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00108561 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGCGCCC GCCCCCGGCT GGCGGTGGTC AGCGCCCTCG GGGTGGTCCA GATCCTGACC TGGGGCACGT CGTACTACCT GCTCACGGTG CTGGCGCCGC CGATCGCCGC CGAGACGGGC TGGCCGCTGC CCTGGATCGT GGGCAGCCTG TCCGCCGGCC TGCTCGTCTC CGGCCTGGTC TCGCCGCGGG TCGGCCGGGC GATCGGCCGC TCGGGCGGCC GCCCGGTCCT GGCGCTCGCC ATCCTGGTGC TGGCGCTCGG CCTCACGGTG ATCGGCCTCG CGCCGAGCCT GCCGGTCTTC TTCGCCGGCT GGCTGATCCT GGGCGCCGGC ATGGGCGGCG GCCTCTACGA CGCCGCCTTC GCCACCCTGG GGCGCCTCTA CGGCGCGGGC GCCCGGCCGG CGATCTCGGC CCTGACCCTG TGGGGCGGCT TCGCCAGCAC GGTCTGCTGG CCGCTCTCGG CCGTCCTGGT GGCGCAGCTC GGCTGGCGGG GCACCTGCCT GGCCTATGCG GGCCTCCTCC TCGCCCTTGC CCTGCCCCTG GTCCTCCTCG TCATCCCGGC CCCGCCGCCG CTCCCGGAGA CGGCCGCGGC CCCGGCGGGG AGCGCCGCCC TGGCGCCCGG CGAGCGGCGG GCCTTCCTGT GCCTCGCCGG CATCCTGACG CTCGGCGGGG CGACGACCGC GATCGTCTCG GTGCACCTCC TCACCCTGCT CCAGGCGCGC GGCGCGTCCC TCGCGGCGGC GGTCGCCCTC GGGGCCGTGG TCGGCCCCGC CCAGGTCGGC GCGCGGGTGA TCGAGATGGC GAACCGGGGC CGGCACCACC CGATCTGGAC CCTCACCGCC GCCATGGGCC TGATCGCGGC CGGGCTCGTC CTGCTGGCGT TCGGCGTCGC GTGGCCGGCC CTCGCGCTCG TCCTCTACGG CGCCGGCAAC GGCGTCTACT CGATCGCGCG GGGCACGCTG CCGCTCGCCC TGTTCGGTCC GCTGCGCTAC GCGCCGCTCG TGGGCCGGCT CGCCCGGCCG AACCTCGTCG CCCAGGCTCT GGCCCCCTCC GCCGGCGCCT TCGTGCTCGC GGCGGCGGGC GCGCAGGCGG CCCTCGCGCT CCTGACCGGG CTCGCCCTCG CCAACCTCGT TCTGGTGGCG GCGCTCTGGC GGGAGCGCCG CGCCGCAGGG GAGGGCGCGC CCGCCGGCGA ACCGGGATCC CGGCCGGATC GTTGA
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Protein sequence | MSARPRLAVV SALGVVQILT WGTSYYLLTV LAPPIAAETG WPLPWIVGSL SAGLLVSGLV SPRVGRAIGR SGGRPVLALA ILVLALGLTV IGLAPSLPVF FAGWLILGAG MGGGLYDAAF ATLGRLYGAG ARPAISALTL WGGFASTVCW PLSAVLVAQL GWRGTCLAYA GLLLALALPL VLLVIPAPPP LPETAAAPAG SAALAPGERR AFLCLAGILT LGGATTAIVS VHLLTLLQAR GASLAAAVAL GAVVGPAQVG ARVIEMANRG RHHPIWTLTA AMGLIAAGLV LLAFGVAWPA LALVLYGAGN GVYSIARGTL PLALFGPLRY APLVGRLARP NLVAQALAPS AGAFVLAAAG AQAALALLTG LALANLVLVA ALWRERRAAG EGAPAGEPGS RPDR
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