| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_0480 |
|---|
| Symbol | |
|---|
| ID | 6133378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 562953 |
|---|
| End bp | 563807 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 82% |
|---|
| IMG OID | 641640803 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001767478 |
|---|
| Protein GI | 170738823 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00245431 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAGCT GGGACGCGTG GCAGACCCTG CTCGCCGTGG CGCGGACCGG CCGGCTCTCC
GCCGCGGCCG GCCGGCTCGG CATCGACGCG ACCACGGCGG GGCGGCGGGT GCGGCGCCTG
GAGGCGGCGC TCGGCCGGCC GCTCCTCGCC CGGGAGGGCG GCCTGCTCGT CCCGACCCGG
ACCTGCCTCG CCCTGATGCC GCGGCTCGAA GCCGCCGAGC GGGCGCTGCG GGAGGTCGCC
GGCGAGGCCG CGTCGGACGA GGCGCCCGGG CCCGGATGGC GCCCGGTCCG GGTCACCGCG
GTCGCGGTGC TCTGCGACCA CCTCCTGGCG CCCGCCGTGC CGCGCCTCCT CGCCGCGCGG
CCCGCCCTGG GGCTCGACCT GATCGCGGAG GACCGCAACC TCAGCCTGAC CCGGCGCGAG
GCGGATCTCG CCCTGCGCCT CGGGCCGCCC GCGCGGGGCG CGGCGGCCGC CCGGCCGGTC
GGGCGGCTCG ATTACGCGGT CTTCGCCGCG GCCGGGGAGG GCGCGCCCGA GCGGCTGCCC
TGGGCCGCCC TCGACGGGGC GCTGGCGCAC CTGCCCGAGG TCCGCTTCGC CGAGCGCGCC
GCCGGCCGGG CCGGGCCGCG CCACCGCGTC TCGCGGCTGG AGACGCTGCT GCGCCTGACC
CGGGCCGGCG GCGTGCGCGC CGTCCTGCCG GAGATCATGG CGGGCCGCGA TCCGGCGCTC
CGGCGCCTCG CACCCGCCGT GAGCCGCCCG ATCTTCCTGA TCGGCCACCC GGAGGACGAG
GGCCAGCCCC TGGTGCGGGC GGTGGCGTCG TGGATCGAGG GCCTGCTCCC GCCCCCGGCC
GACGGCCCGC CGTGA
|
|---|
| Protein sequence | MESWDAWQTL LAVARTGRLS AAAGRLGIDA TTAGRRVRRL EAALGRPLLA REGGLLVPTR
TCLALMPRLE AAERALREVA GEAASDEAPG PGWRPVRVTA VAVLCDHLLA PAVPRLLAAR
PALGLDLIAE DRNLSLTRRE ADLALRLGPP ARGAAAARPV GRLDYAVFAA AGEGAPERLP
WAALDGALAH LPEVRFAERA AGRAGPRHRV SRLETLLRLT RAGGVRAVLP EIMAGRDPAL
RRLAPAVSRP IFLIGHPEDE GQPLVRAVAS WIEGLLPPPA DGPP
|
|---|
| |