Gene M446_0399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0399 
Symbol 
ID6133622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp478931 
End bp479836 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content74% 
IMG OID641640726 
Productpolysaccharide deacetylase 
Protein accessionYP_001767402 
Protein GI170738747 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.763005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCGG ATCCCCGCCG CCCGGAGCGC CGGCTCGCCT ACCGGGCGGC GGTCGACCGG 
CCGCGCCTCG TCCTGCCCGG GGAGAAGCGC GTCGTCGTCT GGCCCGTGGT CAACGTCGAG
CACTGGCTCA TCGACAACCC CATGCCCCGG CAGGTGCTGG TGGCGCCGAC CGCGGCGGCG
CTGCTGCCCG ACCTGCCGAA CTGGGCCTGG CACGAATACG GGATGCGGGT CGGGTTCTGG
CGCTTCCTCG ACGCGTTCGC GCGCCGTGGC ATCCGCCCGA CCCTGTCGAT CAACGGCTCG
GTCTGCGAGG CCTATCCGCG CGTCGCGGCG GCTTCCCGCG ACGCCGGCTG GGAGTTCATG
GGCCACGGCT TCCACCAAGT GCCGACGCAG CGGGTCGAGG ACGAGCCCGC CATGATCGCC
CGCACGGTCG AGGCGATCGC GCGCTTCGCC GGCGGCCCGC CGCTGGGCTG GCTCGGCCCC
GGCCTGACCG AGACCCTGGA CACGCCCGAC CACCTCGCGG CGGCGGGCAT CCGCTACGTC
GGCGACTGGC CGATGGACGA CCGGCCCTGC CGCCTGCGCA CCCGCCACGG CCCCCTCGTC
ACCCTGCCCT ACTCGGTCGA GCTGAACGAC ATCCCGGTCC TGGCGATCCA GCACCACGGG
GCCGAGGAGT TCCTCGCGCG GGCCCTCGCG CAGGTCGAGC GGCTCGCGGC CGAGGCCGCG
AGCGCGGGGC CGCTCGGGGG CGCCAAGGTG ATGGGCTTCG CGATCCACCC CTACATCACC
GGCGTGCCCC ACCGGATCGC CGTGGTGGAG CGGCTCCTCG ACGCCCTCGC GGCCCGATCG
GACGTGCTGT TCTGGCAGGG CCGGGATATT CTCGACTGGT ATCTCGGGAC GGGGGACGAT
GCCTGA
 
Protein sequence
MSADPRRPER RLAYRAAVDR PRLVLPGEKR VVVWPVVNVE HWLIDNPMPR QVLVAPTAAA 
LLPDLPNWAW HEYGMRVGFW RFLDAFARRG IRPTLSINGS VCEAYPRVAA ASRDAGWEFM
GHGFHQVPTQ RVEDEPAMIA RTVEAIARFA GGPPLGWLGP GLTETLDTPD HLAAAGIRYV
GDWPMDDRPC RLRTRHGPLV TLPYSVELND IPVLAIQHHG AEEFLARALA QVERLAAEAA
SAGPLGGAKV MGFAIHPYIT GVPHRIAVVE RLLDALAARS DVLFWQGRDI LDWYLGTGDD
A