Gene M446_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_0115 
Symbol 
ID6131393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp139045 
End bp139902 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content74% 
IMG OID641640455 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_001767134 
Protein GI170738479 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCG AGCCCCGGCC CCGCGCGCTG CCCGTCCTGC TGCCCGTCCT GCTGCCCCCT 
CGGCCGCCCG CGCCGCCGCG GCTGCGCCTG CGCCCGCACC ACGGCGTCGC GCTCGGGCTG
GCGATGCTCC TCGCGGCGCA GGCCGCGCCC GCCCAGGCCC CGAGCGGGGC GGCTCCCCTG
CCGGCCCTCG ACGTCCTGAT CAAGTGGGCG CCGCTCCTCC TCACGGGCTT CGCCTTCAAC
ATCGCGATCT CGCTGCTCGC GATGCTGCTC GGCACCGCCG CCGGGCTCTG GCTCGGCCTC
GCGCTCCTGG CGGAGACCCG GGCCCTGCGC GGGGTCGCAT GGCTCGCCAC GCAGGTCTTC
CGCAACGCGC CCTGGCTCGT GCTCCTGTTC TTCGTGATGT TCCTGGTGCC GTTCCAGGTC
ACGGTGTTCG GCCTGCGCAT CCCGCTGCCC GACTGGGTCA AGGCGACCGG CGGCTTCGCC
CTGCCGGTCA TGGCCAACGT CGCCGAGATC GTGCGCGGGG CCGTGCGCTC GATCCCGACC
ACGCAGTGGG AGGCGGCGGA GGCCCTGGCC TTCACCCGGC GCCAGACGAT GTGGCGCATC
ATCCTGCCGC AATGCCTGAA GCGCATGCTG CCGCCCTGGA TGAACCTCTA CGCCCTCGTC
GCCATGGCGA CCGTCCAGGC CTCGATCGTG GGCGTCTCCG AGATGCTGAC GCTCACCGCG
CAGGTCCACG CCGCCGAGGG CGGGCGGCCC GAGCTCTTCG CGCCGCTCTA CGGCTTCGCC
CTCATCTGCT TCTTCCTCTA CTGCTACCCG ATCGACCGCT GGACGGCCCG CCTGGAGCGG
CGCTTCCACG TCGCCTGA
 
Protein sequence
MSGEPRPRAL PVLLPVLLPP RPPAPPRLRL RPHHGVALGL AMLLAAQAAP AQAPSGAAPL 
PALDVLIKWA PLLLTGFAFN IAISLLAMLL GTAAGLWLGL ALLAETRALR GVAWLATQVF
RNAPWLVLLF FVMFLVPFQV TVFGLRIPLP DWVKATGGFA LPVMANVAEI VRGAVRSIPT
TQWEAAEALA FTRRQTMWRI ILPQCLKRML PPWMNLYALV AMATVQASIV GVSEMLTLTA
QVHAAEGGRP ELFAPLYGFA LICFFLYCYP IDRWTARLER RFHVA