| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_6207 |
|---|
| Symbol | |
|---|
| ID | 6142346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010510 |
|---|
| Strand | - |
|---|
| Start bp | 486799 |
|---|
| End bp | 487764 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641640250 |
|---|
| Product | ornithine cyclodeaminase |
|---|
| Protein accession | YP_001766933 |
|---|
| Protein GI | 170745476 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0455278 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCATCG TTCCCGAGCA CGCGATCGAC GGGCTGCTGA CCGAGGCGGA GTGCTTCGGC
GCCGTCGAGC AGGTCTTCGC CTCCATGGCG CGGCGGCGGG CCGGGAACTT CCCGGTCGTC
CGGGAAGCCA TCGGCCACGC CGACGCGCTC TACGGCTTCA AGTCCGGCTT CGACCGGGAC
AGCCTCGCGC TCGGGCTCAA GGCCGGCGGC TTCTGGCCCG GCAACGCCGC GAAGGGCCTG
ACCAACCACC AGTCGACGGT GTTCCTGTTC GACGCCGATA CCGGGCGCTG CCGGGCCGTG
GTGGGGGGCA ACCTCCTCAC GGCGCTCCGC ACCGCCGCGG CCTGCGCCAT CTCCATCCGG
CACCTCGCTC GCGAGGGCGC GCGCGTGCTC GGCATGATCG GCGCGGGCCA CCAGTCGGCG
TTCCAGCTGC GCGCGGCGCT GGCGCAGCGG CCGTTCGAGC GGGTCCTCGC GTGGAACCTG
CATCCCGGCA TGTTCGGCCG GATGGAGGCG GTGGCGCGGG AGCGCGGCGT GCCGTTCGAG
GTGGTGGACC TCGACCGCCT CGGCGCCGAG GCCGACGTCG TCGTGACGAT CACGTCCTCC
TTCGCGCCGA TCCTGAAGGC CGCGCAGGTC CGGCCGGGCA CGCACGTCGC CTGCATGGGG
ACGGACACGC GCGGCAAGCA GGAGGTGGAG GCCGAACTGC TCGCCGCCGC GACGGTGTTC
ACCGACGAGG TCGCGCAGTC GGTCAGCCTC GGCGAGGCGC AGCACGCCGT CGCGCGGGGG
CTCCTCGCCG CGGATTCCAT CGTGGAGATC GGCGCGGTGA TCAACGGCGA TCATCCGGGC
CGCGTGTCGG ACGCCGAGAT CACGGTCTTC GACGGAACCG GGGTCGGACT GCAGGACCTC
GCGGTCGCCG CGGTGGCCGT CGACCGCGCG GTGGCCAAGG GGCTGGCGAC GGAGGTGGAT
TTCTGA
|
|---|
| Protein sequence | MIIVPEHAID GLLTEAECFG AVEQVFASMA RRRAGNFPVV REAIGHADAL YGFKSGFDRD
SLALGLKAGG FWPGNAAKGL TNHQSTVFLF DADTGRCRAV VGGNLLTALR TAAACAISIR
HLAREGARVL GMIGAGHQSA FQLRAALAQR PFERVLAWNL HPGMFGRMEA VARERGVPFE
VVDLDRLGAE ADVVVTITSS FAPILKAAQV RPGTHVACMG TDTRGKQEVE AELLAAATVF
TDEVAQSVSL GEAQHAVARG LLAADSIVEI GAVINGDHPG RVSDAEITVF DGTGVGLQDL
AVAAVAVDRA VAKGLATEVD F
|
|---|
| |