Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3154 |
Symbol | |
ID | 6124815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 3499231 |
End bp | 3499989 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641639748 |
Product | ABC transporter related |
Protein accession | YP_001766434 |
Protein GI | 170734487 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0779232 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCGCC TCGAACGCAT CGACAAGTCG TTCGGCGTGC ATCGCGTGCT GAGCGGGATC GACCTCGCGC TGCAGCCGGG CAGCGTGACC GCGCTGATCG GACCGTCCGG CAGCGGCAAG AGCACGCTGC TGCGCTGCGT GAACCTGCTC GAAGTGCCCG AGGCGGGTGC GCTGGTCGTC GGCGATGCGC GCATCGACTT CGTGCCGGCG CGCCGGCCGT CGCGCGACGC GGTGTTCGCG GTGCGAAAGC AGACCGGCAT GGTGTTCCAG AACTTCCAGT TGTTTCCGCA CCTGAGCGTC GTGCAGAACG TGATGGAGGG GCTCGTGACC GTGCAGCGCT GGCCGCGCGA GCGGGCCCGG GAGCGCGCGC TCGCGCTGCT CGACAAGGTC GGCATCGCGG ACAAGGCCGA CGCATGGCCG GCCACGCTGT CGGGCGGACA GCAGCAGCGC GTGGCGATCG CGCGGGCGCT CGCGCCGTCG CCGCAGGTGC TGCTGTGCGA CGAGCCGACG TCGGCGCTCG ATCCGGAGCT GTCCGTCGAA GTGGTCGAGG TGCTGCGCCA GCTCGCGCGC GAAGGCACGA CGATGCTGAT GGCCACGCAC GACCTGCGCC TGGCCGCATC GATCGCGCAC GATGCGGTGT TCCTCGCCGA TGGCCGCATC GTCGAAGCGG GCGCCTCGCG CGACCTGTTC GGCCGGCCGC GCGACCCGCG CACCGCGAAG TTCGTCGCGA CGCTCGCGCA AGGCGTGCCG GCGTTCTGA
|
Protein sequence | MIRLERIDKS FGVHRVLSGI DLALQPGSVT ALIGPSGSGK STLLRCVNLL EVPEAGALVV GDARIDFVPA RRPSRDAVFA VRKQTGMVFQ NFQLFPHLSV VQNVMEGLVT VQRWPRERAR ERALALLDKV GIADKADAWP ATLSGGQQQR VAIARALAPS PQVLLCDEPT SALDPELSVE VVEVLRQLAR EGTTMLMATH DLRLAASIAH DAVFLADGRI VEAGASRDLF GRPRDPRTAK FVATLAQGVP AF
|
| |