Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2674 |
Symbol | |
ID | 6124337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 2980007 |
End bp | 2981785 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641639266 |
Product | O-antigen polymerase |
Protein accession | YP_001765956 |
Protein GI | 170734009 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTTCTA CTTTTTCCCG TTCGTTGTCG CTCGTTGCGC TGGCTGTCGC CCTGATCGTG CCGTACGCGA TCACGAATCA CACGTATCCG ATCCCGACCT TCTATTCCGA GTTTTCCGCG CTGGTGCTGT ATCTGCTGGT GGGCGTGTCC GTCGTGCTGC TCGCGCGCAC CGGTCGCCCG GCCGAGCCGT TTGCCGCGCC GGCCGCGCTC GTCGTGCCGC TCGGCTTTGC GGCGGTGCTG ATCGCGCAGG TCGCGCTGAT CCCGCTCAAG GTGCCGTCGA TGAACTGGCT GGCGGTCGGT TATCTCGCGG CCGCGCTGGT CGCGATGCAG GCCGGCTACG CGCTCGCGCG CGACGGGATG GCGGAAACCG TGTCGCGGAT GATGGCCGGC GCGCTGCTCG TGGGCGGCGT GTTCGCGGTC GGTACCCAGA TCGTGCAGCT GTTCCACCTC GAAGCGGCCG TCTCGCCGTT CGTCGTCGTG TACAACATCG CGGTCGACCG CCGTCCGTAC GGCAACATGG CGCAGGCGAA CCACCTGGCC AGCTACATCG CCTTCGCGCT CGCGGGCGCG CTGTATCTGG TCCAGACACG CCGGCTCGCG GTGTGGGCCT GGCTCGCGTT GTCGCTCGTG CTGTCGGTCG GTCTCGCGCT GACGGTGTCG CGCGGGCCGT GGCTGCAGGT GGCGGTGATG GTCGTCGCGG GCTTCTGGAT GGCGTGGGTC GAATCGCGCC GCACGCCGGG CAATGCGCGT GCGTGGCTGA TACCGGTCGT GCTGGCGGTC GCGTTCATCG CGGTGAACGT CGCGGTGCGC TGGGCCAACG TGCACTATCA CCTGAATCTC GCGGAGTCGG CCGCCGACCG GATGCGCGAC GCCGGGCAGA TCGCGCCGCG CCTCGCGCTG TGGAAGTACG GGCTCGCGAT GTTCCGCGAG CATCCGCTGC TCGGTGTCGG CTGGGGCGAA TTCCCGTCGC ATCAGTTTGC GCTCGTGCGC ACGCTCGGCG GCGTCGAGAT CGCGAACAAC TCGCACGACA TCTTTATCGA CCTGCTCGCG AAGTCCGGTC TCGTCGGGCT CGGCGTGCTC GCCGTCACGC TCGTCATGTG GTTCGTGCGC ACGGTGCGGG CGCCGCAGTC GAGCATGCGC GTGTTCGGCT TCGCGCTGAT CGGCATCCTG CTGATGCATG CGCTGGTCGA GTATCCGCAG CAATACATGT TCTTCCTGCT GCCGGCGATG TTCGTGATCG GGCTGCTCGA GGTGAAGCCG CTGCGCGTCC TGCCGGGGCG TGCGGCATTC GGGCTGTTCG CGGTGCTGTC GTTCGGCGGC GTGCTGGCGG CGGTGCCCGT GCTGCGCGAC TACCAGCGCG CGGAAGTGCT CTATTACGGC AGCAGCCCGG CCGCGCAGTA TCGCGATGCG CCGTCGCTGC TGTTCGGCGC GTGGGGCGAT TACGGTGCGG CGACGCTGCT GACCATTTCG CCGGACAACC TGCCGCTCAA GCTCGCCGCG CACGAGCGTG CGATCGCGCT GCTGCCGGGC GAGACGGTGC TGCGCCGCTA CGCGGTGCTG CAGGCGCTGG CCGGCCGCGA AGCCGACGCG CTCGATACCG TCGCGCGCCT GCATGTGTTT GCGAAGGAGT TGAAGGACTG GCCGCAACAA CTGGCCGCGT TGTACAAGCT GTGCGGCGAG GAGCCGGCGC TGAAGACGTT CAGGGCGGCG GTCGTCGCCA AATACGGGGA AGCGCCGGCC GACGAGGGTG ACGATTCGGA CGACGACGAT TCGGATTGA
|
Protein sequence | MPSTFSRSLS LVALAVALIV PYAITNHTYP IPTFYSEFSA LVLYLLVGVS VVLLARTGRP AEPFAAPAAL VVPLGFAAVL IAQVALIPLK VPSMNWLAVG YLAAALVAMQ AGYALARDGM AETVSRMMAG ALLVGGVFAV GTQIVQLFHL EAAVSPFVVV YNIAVDRRPY GNMAQANHLA SYIAFALAGA LYLVQTRRLA VWAWLALSLV LSVGLALTVS RGPWLQVAVM VVAGFWMAWV ESRRTPGNAR AWLIPVVLAV AFIAVNVAVR WANVHYHLNL AESAADRMRD AGQIAPRLAL WKYGLAMFRE HPLLGVGWGE FPSHQFALVR TLGGVEIANN SHDIFIDLLA KSGLVGLGVL AVTLVMWFVR TVRAPQSSMR VFGFALIGIL LMHALVEYPQ QYMFFLLPAM FVIGLLEVKP LRVLPGRAAF GLFAVLSFGG VLAAVPVLRD YQRAEVLYYG SSPAAQYRDA PSLLFGAWGD YGAATLLTIS PDNLPLKLAA HERAIALLPG ETVLRRYAVL QALAGREADA LDTVARLHVF AKELKDWPQQ LAALYKLCGE EPALKTFRAA VVAKYGEAPA DEGDDSDDDD SD
|
| |