Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2668 |
Symbol | |
ID | 6124331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 2971493 |
End bp | 2974180 |
Gene Length | 2688 bp |
Protein Length | 895 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641639260 |
Product | type VI secretion system Vgr family protein |
Protein accession | YP_001765950 |
Protein GI | 170734003 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria [COG4253] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCGC AAGCGTTAAG AAGCGCGTTG CTGGCCGGAC CGGTTCAGCA TGAGCGCCTG ATCAAACTGG ATACCCCGCT CGGGCCCGAC GTCCTGTTGC CGCAGCGCGT CACGGGACGA TCGCGCCTCG GACGCCATTT CGAGTTCACC GTCGATACCG TGTCGGTATC CGACGACCTC GAACTCAAGA AACTGATCGC GCAGCCGGTG ACGCTGTGGA TCCAGCAGGC CGACCAATCG TACGCGCCGC ACCACGGCTA CGTGCATGCG GCCCGCCGGC TCGGGTCGGA CAGCGGCGTC GCGCACCATC AGATCGTCTT TGCGTCGTTC CTGCACTTCC TGAAGTTCCG CCGCGATCAG CGCATCTGGC AGGACCGGTC GGCGGACGAC ATCATCGCCG ACGTGCTGAA CCAGCATCCG CAGGCCAAGG GCCGCTTCAC GTTCAAGCTC TACCAGCCGC TGCCGTCGCG CTCGTTCTGC ATGCAATACG AGGACGACTG GAATTTCGTC CATCGCCTGA TGGAATCGGA AGGCCTGTAC GGTTTCTGGG AACAGGACAG CGACGGCAAG TCGCACCGGC TCGTCATCGT CGATCGCATC GACGCGTTGC CCGCGCTGTC GCCGCGAACC GTGCGCTTTC ATCACGCGGG CACGGGCGAC GAAGCCGACA CGCTCGTCCA GTTCACCGGT ACGCGCACGC TGCGCAGCGT CGCGCGCACC ACGCGCACGT TCGACTACAA GCAGCCGCCC ACCGCGTCGA ATCCGAAGGC CACTCATACG CCGACGATCG CGAACCAGGG CGACCTGCCG CAGCAGCTCG AAGTCTACGA ATACACGGGT GCCTACACGT ATCCCGAGCA GTCACGCGGC GACCATCTGT CGAAGATCTG GATGGAAGAG CAGGAATCGC ACGCGAAGCG CTTTCACGGT GTCGGCGGTG TGCGGCGCAT GGACGCGGGA CGCGTGTTCG AGTTCGCGGA ACATCCCGAA CACGACAAGG ACGATGCCGG CCAGCGCGAA TTCGCCGTGA TCGAAACGGC GTGGGTCATC GTCAACAACC TGCCCGTGGC CGACGAGCCG GCCGTTTTCC CGCACAGCCT GCAGGCCGAG ATCGGCAGCA TCATGCAGGC CGCCGATACG GACCGGTCGC GCGTGCGTCA TCCCGACGGC AGCGAGGGCT TCTTTCAGAT CCGCATCGAA GCGCAGCGCA CGACAGTGCC GTTCCGTAGC CCGTTCGAGC ACGCGAAGCC GCCGATGCAT CTGCAATCGG CGATCGTCGT CGCGCCGCAA GGCGAAGAAG TCCATACGGA CGAGCTCAAC CGCGTCAAGG TCCGCTTTCA CTGGGACCGC TTGAACGACG GCGACGAAAA GGCGTCGTGC TGGCTGCGTG CCACGGCGTC CGATTCGGGC AATGGCTACG GTGCCGTCCA CCCGCACCGC AGCGGCGAGG AAGTGCTGGT CGACTTCCTC GGCGGCGACT GCGATCGGCC GATCATCGTC GGCAAGGTCT ACAACGGCGC GACGAGCCCG CAATGGCACA GCAACGGCAT CCTGTCCGGG TACCGGTCCA AGGAATACGC GGGTGCCGGC TACAACCAGC TGGTGCTCGA CGACGCGACG TCGCAGAACC GCGTGCACCT GTACAGCAGC CAGGCCAACA CGCACCTGCA CCTCGGCTAC CTGATCGACC ACACGGGTAA CAACCGCGGC AGCTATCTCG GCAGTGGCTT CGACCTGCGC TCGGACGCCT ACGGCGCCGT GCGCGCGAAC CGCGGGCTGT ACGTCACGAC GCATCCCAAG CAGGCGGCCA GCCAGCCGCT CGACGTCGAC GAGACCCGGG AGCAGCTCGT GCGCGCGCAA GGGCTGATCG ACGCCATGTC GCAGGTCAGC GCGCAGCATC AGGGCGAGTC GCTCGACCCC GGCCATACGG CGCTGAAGCA GTTCAGCGAC TCGACGCAGA ACAGCGTGAG CGGCAGCGCG TCGGGCGGCC GGACCGCCGG CGGCGGAACC GGCAACGCCA ACGCGTTCAA GGAGCCCGTG ATGCTGTTCG GCAGCCCGGC CGGCATCGGG ATGTCCACGC AGCAGTCCGC GCAATTTTCC GCGGACCAGC ACATCAACCT CGTCAGCGGG CAAAGCACGC ACGTCGCCGC CGGGAAATCG CTGATCGCCA GTGTCCTCGA CCGGATCAGC CTGTTCGCGC AGAACGCGGG GATGAAGCTG TTCGCCGGCA AGGGCAAGGT CGAAGTGCAG GCGCAGGCGG ACAACATCGA GCTGACCGCG CAGAAGGCGC TGAAGCTGAT CGCCGTCACG CAATCGATCG AAGGCGCCGC GGCGAAGGAG ATCCTGTTGA CGTCCGGCGG CGCCTATATC CGCATCGCGG ACGGCAACAT CGAGGTGCAC GCGCCCGGCA AGATCGACAT CAAGGGCGCG CAGCATGCGT TCAGCGGCCC CACCCACCTG TCGCAAACGA TGCCGACGCT GCCGAACTCC AACGGCAACT ACGACCAGGC GTTCATCGCG CACTGGGCCG GCACCGACAT TCCGGTCGCG AACACGCGGT ACCAGATGTT CTCGAACGGC AAGCTGCTCT CCGAAGGCGT CACCAACGCG GCAGGCGAAA CCGGGCTCAC GCAGAGCCAC GTGCCGCACG ACGTCGTGGT CAAGTTTCTA GGGAAATCGA ATGGCTGA
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Protein sequence | MNSQALRSAL LAGPVQHERL IKLDTPLGPD VLLPQRVTGR SRLGRHFEFT VDTVSVSDDL ELKKLIAQPV TLWIQQADQS YAPHHGYVHA ARRLGSDSGV AHHQIVFASF LHFLKFRRDQ RIWQDRSADD IIADVLNQHP QAKGRFTFKL YQPLPSRSFC MQYEDDWNFV HRLMESEGLY GFWEQDSDGK SHRLVIVDRI DALPALSPRT VRFHHAGTGD EADTLVQFTG TRTLRSVART TRTFDYKQPP TASNPKATHT PTIANQGDLP QQLEVYEYTG AYTYPEQSRG DHLSKIWMEE QESHAKRFHG VGGVRRMDAG RVFEFAEHPE HDKDDAGQRE FAVIETAWVI VNNLPVADEP AVFPHSLQAE IGSIMQAADT DRSRVRHPDG SEGFFQIRIE AQRTTVPFRS PFEHAKPPMH LQSAIVVAPQ GEEVHTDELN RVKVRFHWDR LNDGDEKASC WLRATASDSG NGYGAVHPHR SGEEVLVDFL GGDCDRPIIV GKVYNGATSP QWHSNGILSG YRSKEYAGAG YNQLVLDDAT SQNRVHLYSS QANTHLHLGY LIDHTGNNRG SYLGSGFDLR SDAYGAVRAN RGLYVTTHPK QAASQPLDVD ETREQLVRAQ GLIDAMSQVS AQHQGESLDP GHTALKQFSD STQNSVSGSA SGGRTAGGGT GNANAFKEPV MLFGSPAGIG MSTQQSAQFS ADQHINLVSG QSTHVAAGKS LIASVLDRIS LFAQNAGMKL FAGKGKVEVQ AQADNIELTA QKALKLIAVT QSIEGAAAKE ILLTSGGAYI RIADGNIEVH APGKIDIKGA QHAFSGPTHL SQTMPTLPNS NGNYDQAFIA HWAGTDIPVA NTRYQMFSNG KLLSEGVTNA AGETGLTQSH VPHDVVVKFL GKSNG
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