Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2444 |
Symbol | |
ID | 6124108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 2738533 |
End bp | 2740347 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641639035 |
Product | surface antigen (D15) |
Protein accession | YP_001765727 |
Protein GI | 170733780 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0729] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.21927 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCGGGGC AGTCGAACCA GCAAGCACAC ACGGCGCATC ACGCGGGCCC GCGCGCGGCC CGCGATCGCG CCGGCGCCGC GGCCCGCGTC GCGCGGGCGG CCCTCGCGGG TTGCCTGGCC GCGTGTTTCG CGCTGCCGGC CCATGCGAAG TACGACGTCG ACATCGATGC GCCGCGCTCG ATCCGCAAGC TCCTGAAGAC CCATCTCGAT ATTGCCCGCT TCGCGAAGCG CGACGACATC AGCGACGACC AGTTCGACTT TCTCGTGACC GCCACGCCGC AGCAGGTGCG CGACCTGACC GCGACGGCCG GCTATTTCTC GCCGGTCGTG CGCACCGACG TGCGCACCCG CGACGGCAAG CGCGACGTGC GCATCGCGGT CGATCCGGGC AAGCAGACCG TCGTGTCGAC GGTCGACCTG ACGTTCAAGG GGCCGGTTGA GACCGAGGAC CCGAAGCAGG AAACCGCGAC TCGCTTCGCG TTCTCGATGA AGCCGGGCGA TCCGTTCACG CAATCCGACT GGGACGACGC GAAGGGCGCG GCGCTCCGGC AACTGCAGTC GCGCCGCTAT CTCGGCGCGA AGATCGTGTC GTCCGAGGCG CGCATCGATC CGCGCACGCA GCGGGCGACG CTCGCGGTCG CGTTCGACAG CGGCCCGACG TTCACGATCG GCAAGGTTGA TGTCGACGGC GTGCGCCGTT ATCCGGAAAG GATCGTCACG AACGTCAATC CGCTGTCGGA AGGCGAGATC TACGACGTGC AGCGGATCGC CGAATTGCAG CGTCAGTTGC AGAACACGCC GTACTACGCG AGCGTCGCGA TCGACGTCGG CGACGATACG TCGAAGCCCG AGCGCACGCC CGTGCACGTG AAGGTCAGCG AGTTCCCGTA CAACAACATT CGCGGCGGCG TCGGCTTCGC CACCGATACC GGGCCGCACG TGCAGGGTTC CTATACGTAT CTCGACACGT TCGGCGCCGC GTGGCCGCTG ACCGTGTCGG GCAGGCTCGA CCAGATCCAG CAGTACGGGC AGGTCCAGCT GTCGATGCCG CCGGGCGAGA AGGGCTGGAC CAACAGCGTG CTCGCGTCGT ACACGAACAC CAACGTGTCG GACACGCGCA TCTACAGTGC GCGGGTCGGC GTGCAGCGCA CGCGCACCGG CCAGTTCATC GACTATGCGT ATTCGCTGAT GTACTACCAG GATCGGCTCG ACCAGAACGG CGCGGGGCCG ACCACGAGCC GCGCGCTGGT GCCGCAGTGG GCGTGGACCC GCCGCAACGT CGACGATCCG CTGTTCCCGC GCTCGGGCAA CCTGATTCAT GCGGAGGCCG GCTTCGCGGT CAAGGGCGTG CTGGCCGACG AAAGCTTCAT TCGCGGCTAC GCGCGCGGGC AGCAGTATTT GCCGATCGGC AAGCGCGACC TGTTCGTGTT CCGCGCGGAG CTCGGCGGCG TGTTCACGAG CGGCAGCTCG AGCGGCGTGC CGGCGTCGCT GCTGTTCCGC GCCGGCGGCT CGAACTCGGT GCGCGGCTAC GGCTACCAGA GCATCGGCAA CAGCGTCGAC GGCTCCGTTT TGCCGACCAA GTACCTGATG ACGGGGACGG CCGAATACCA GCACTGGTTC AACCGCGACT GGGGCGCCGC GACGTTCTTC GACATCGGCA CCGCGACCGA TGCATGGGGC GAGCGCGTGT TTTACCCAGG CGTGGGCGTC GGTGCTCGCT GGCGCAGCCC GGTCGGCCCG ATCAACGTCG ACGTCGCGTA CGGCTTGCGC AACCACAGCG TGCGCCCGTA CCTGACGCTC GGCATCGCTT TCTGA
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Protein sequence | MAGQSNQQAH TAHHAGPRAA RDRAGAAARV ARAALAGCLA ACFALPAHAK YDVDIDAPRS IRKLLKTHLD IARFAKRDDI SDDQFDFLVT ATPQQVRDLT ATAGYFSPVV RTDVRTRDGK RDVRIAVDPG KQTVVSTVDL TFKGPVETED PKQETATRFA FSMKPGDPFT QSDWDDAKGA ALRQLQSRRY LGAKIVSSEA RIDPRTQRAT LAVAFDSGPT FTIGKVDVDG VRRYPERIVT NVNPLSEGEI YDVQRIAELQ RQLQNTPYYA SVAIDVGDDT SKPERTPVHV KVSEFPYNNI RGGVGFATDT GPHVQGSYTY LDTFGAAWPL TVSGRLDQIQ QYGQVQLSMP PGEKGWTNSV LASYTNTNVS DTRIYSARVG VQRTRTGQFI DYAYSLMYYQ DRLDQNGAGP TTSRALVPQW AWTRRNVDDP LFPRSGNLIH AEAGFAVKGV LADESFIRGY ARGQQYLPIG KRDLFVFRAE LGGVFTSGSS SGVPASLLFR AGGSNSVRGY GYQSIGNSVD GSVLPTKYLM TGTAEYQHWF NRDWGAATFF DIGTATDAWG ERVFYPGVGV GARWRSPVGP INVDVAYGLR NHSVRPYLTL GIAF
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