| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2209 |
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| Symbol | |
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| ID | 6123873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 2471828 |
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| End bp | 2474515 |
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| Gene Length | 2688 bp |
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| Protein Length | 895 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641638791 |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_001765492 |
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| Protein GI | 170733545 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria
[COG4253] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTCG TTGCGGCATT GAGGGGCTAT TCGCAAGCCA CTCGCCACAT CCAGATCGAT
ACGGTCATGG CCGGAGCATT CGCAGTCGAA CGCTTCCACG GTCGCGAGGC AGTGAACGAA
TCGTTTCGCT TCGAAATCGA TGTGCTATCG AGCGAACCCT TTCTCGATCT CAGTCCGCTG
ATCGGCAGTG CCGCGCGCCT GCGACTCGCG ACGGGGGCGG GTGAACGCAG TTGGAACGGC
TACGTCACGC ACGCGGCCTA TGCCGATACC GACGGCGAGA TCACGCGTTA TCGGCTGACC
CTGGAGTCGT GGCTCGCATT CCTGCACCTG CGTCGCAATT GCCTGTATTT TACGGATCTC
GACACGATGG GCATTTGCGA TCGCGTGTTC GGCGACTATC CGGAAGCGCA CTGGCGATAC
GACACCAGCG AAGCGCAGCG TACCTACGCG CTGCGTGGAC AGTATCGCGA GACGGACTTT
GCGTTCGTCC TGCGGCTGCT GTCGGAAGCG GGCCTGTCGT TTCACATCGA GCATGCGCAG
GAAGCCAGTG GATCGAAGCC GTCCGGCAAT CATACGGTCG TGATCGCGGA CCACCGCGCC
GAGCGGAAGA ACGGCGCGTC GATCGGGTAT CAAATCCAGG ACGTGGGCGA TCCCGACGGC
GTCATCACGC AGTTCACGGA ACGCCACCAG TGGGTGCCCG ACAAGGTCGT CGCGACGAGC
TGGAAGGCGA GCGAAGTGCA GGCGCTGGCC GGTCACGCCG CGGCTGCAGC GGATGCGGAT
GCCCCCGTTC TTCCGGTACG CGAAGTGTTC GACGGCCAGC GGGCCGGCCG TTTCGATACG
TCGGCGCAAG CGCAGCGCTA TGCCGAACAG CGGCTCGACG CGCTGCGCCT GCCCAAGACG
ATTCACTACG GCGCAGGTAC GGCGCGCACG CTGGAAGTCG GCAAGCTCCA CACGCTGACC
GGCTATCTGA ACCGCGCGCA CACGTTCGTG CCGCTGTCGA TCGAACATGA GGCGGTCAAC
AACCTCGGCG CCCAGATCGG CGAGCTGTTG AAGCGGGGGG AACTGACGGC CGGGCACTAT
CGCAATCGCT TTGTCGCCAT ACCCGAAGGG GTGCCGATCA TTCCGCCGCT CGTCGAGTGT
CCGGTCGTGC ACGGCGTGCA GACCGCGATC GTGGTGGGCG AGCCGAGCGC AAGCGTCAGC
AGCACCCGCG ATCATCAGGT GCGTATCCAG TTTCCCTGGA TGCGCGGTAC GGCACCGCTG
CGAGGCGGAC TGACCGATAC CGCGAGCCGG TCGAATCCGG CCGGGCATGC GCCCGGTGAT
CACCGGTCCG GGGTGCTGGC GCGAATTGCC GAGCAGGCGG CCGGCCCGAA TTTCGGGCAT
GTCTTTACGC CGCGTGTTGG CGCGGAAGTC GTCGTGGGTT TCGATTCGGG CAACATCGAC
CAGCCCGTCG TGCTCGGACA GGTCTACGGC GGGCGCGTGA AGCCGCCTTT TGCGGCCGGC
GACGGCAGTG GCGCCAATCA TCCCGGCACG CTGACCGGTC TGCAGACGCA GACGCTCGAC
GGACAGCCGG GCAGCCGCTG GGTGATGGAC GATGCGAGCG GCCAGTTGCG CCACGAACTC
GGCAATTCGG TGGCCGATAG CCGCCTCGCG CAGGGCTATC TGATCGACCA GCAGGCATCG
ACACGCGGTG CGTATCGGGG AGAAGGCTTC GAGCTGTCCA CGCAAGGCTG GGCGGTCGCG
CGCGCCGGCG AAGGGATGCT GGTGTCCAGC ACGGCCCGTC CCAACGCCGG CTCGACGCAG
ATGGATTTGG CGGAAGGCGT CGGCCAGCTT GCACGGGCCG TCGAGACGGC AAAGGGGCTC
GACGCCGCGG CGACCGGGGC AAAGGCGGAC GGCCTCGGCG GCAACCAGGC ACAGGCCGAT
TTCCTCAAGG CGATCGATCC GGCCCAGGAC GGCAAATACA CAGGGGCCGT CAATGGCCAG
GGCGCGACCA AGCCCATGGG CAAGCAGCGC AGCGGCGGCG ATCCGGTCGA GCGGTTCGCC
ACCGCTGCCG TCGTATTCGA TTCGCCGGCG AATCTCGTCC TGACCACGCC GAACAGTGCG
GCGGCCTATG CGGCGGAACA CGTACACCTG ACCGCGCAAG GCGATGTGCA CGTCGCCGCC
GATGCAACGG TGGCGGGCGT TTCCGGCGAC GCCGTGAGTT TCTACTCGGC GGCGGGAGGG
GTGAAGATCA TCGCGAACCA CGGCCCGGTC ACAGTGGAGG CGCATACGTC CGCGATGGAG
ATACTGGCCG ACCAGTCGAT CCAGGTTTCA TCGACCGAAG ACCGCGTCGA CGTACTGGCG
AAGGACACCA TCGTGCTGCA GCAAGGCCCG AACAGGATCA CACTCAGCGG CGCGGACATC
ACGGTCGAAA CACCGGGGCA GTTTCAGGTG AAGTCCGGAT CGCACGTATT CGTCGGCCCG
CAAAGTGCGC CGCCGAATCT TTCGCCATTG CCGGATTCCC GCGAACGCGC GTTCGACGAG
GGGTTCATTC TGAAGGATCG CGACAGTGGC AAGCCGGCCG CGTTTCGGCC GTACCGGATC
ACGTTGGCGA ACGGCGACGT TCAGCATGGC GTGACGGATG AACTGGGACA CACGCATGTG
GTGAAGACCC TGGCTTCCGA AATTCTCAAG ATCGACGTCG AGGGCTGA
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| Protein sequence | MDVVAALRGY SQATRHIQID TVMAGAFAVE RFHGREAVNE SFRFEIDVLS SEPFLDLSPL
IGSAARLRLA TGAGERSWNG YVTHAAYADT DGEITRYRLT LESWLAFLHL RRNCLYFTDL
DTMGICDRVF GDYPEAHWRY DTSEAQRTYA LRGQYRETDF AFVLRLLSEA GLSFHIEHAQ
EASGSKPSGN HTVVIADHRA ERKNGASIGY QIQDVGDPDG VITQFTERHQ WVPDKVVATS
WKASEVQALA GHAAAAADAD APVLPVREVF DGQRAGRFDT SAQAQRYAEQ RLDALRLPKT
IHYGAGTART LEVGKLHTLT GYLNRAHTFV PLSIEHEAVN NLGAQIGELL KRGELTAGHY
RNRFVAIPEG VPIIPPLVEC PVVHGVQTAI VVGEPSASVS STRDHQVRIQ FPWMRGTAPL
RGGLTDTASR SNPAGHAPGD HRSGVLARIA EQAAGPNFGH VFTPRVGAEV VVGFDSGNID
QPVVLGQVYG GRVKPPFAAG DGSGANHPGT LTGLQTQTLD GQPGSRWVMD DASGQLRHEL
GNSVADSRLA QGYLIDQQAS TRGAYRGEGF ELSTQGWAVA RAGEGMLVSS TARPNAGSTQ
MDLAEGVGQL ARAVETAKGL DAAATGAKAD GLGGNQAQAD FLKAIDPAQD GKYTGAVNGQ
GATKPMGKQR SGGDPVERFA TAAVVFDSPA NLVLTTPNSA AAYAAEHVHL TAQGDVHVAA
DATVAGVSGD AVSFYSAAGG VKIIANHGPV TVEAHTSAME ILADQSIQVS STEDRVDVLA
KDTIVLQQGP NRITLSGADI TVETPGQFQV KSGSHVFVGP QSAPPNLSPL PDSRERAFDE
GFILKDRDSG KPAAFRPYRI TLANGDVQHG VTDELGHTHV VKTLASEILK IDVEG
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