| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2206 |
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| Symbol | |
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| ID | 6123870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 2466577 |
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| End bp | 2469360 |
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| Gene Length | 2784 bp |
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| Protein Length | 927 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641638788 |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_001765489 |
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| Protein GI | 170733542 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACGA GCAAGGACAT CCTGCAGGCG CTGCTTGGCG GCTGGACACA GCATGAACGG
TTCCTGCAAC TGACGACACC GCTCGGCACG GATGCGCTGG CGGCCGAGTG TCTGGAGGGG
TGGGAGGCAA TCGACGGCGG CGGTTTCCGC TTCGAGATCA CGGCACTCTC CGACAACCCT
GCATTGCCGA TCGCGCGGCT GGTCGGCGGC CCGGTGCTCG TCGAATGGCC GACCACGGAC
GGTGGCGGCC AGCGGCGCCC GTTCCATGCA CACGTCGCCG CGGCCGAACT GGTGGGCTAC
AACGCTGGCC TGGCGCGCAT TCGTCTCGTG CTCGAGCCCT GGCTCGCGAT GTTGCGGCAG
CGCGTCGACA GTTACCACTT CAACGATGCC AGCGTCATCG ACATCAGCGA GCAGATCTTC
GGCTATTACA CGCGCGGCGC GGTCGTGCCG GCGTGGCGAT GGGCGTTGGC CGATAGCGAG
CGATACCTGC GACGCAGCCT GACCGTGCAG GCCGGCGAGT CGGATTTCGA CTTCCTGTCG
CGGCTATGGG CCGAAGAAGG GATTTACTAC TGGTTCGAAC ACACCGGCGA CGCGCAGGCA
AAGACGCTCG GCGGCCACAC GCTCGTACTG GCGGACTCCA ACGCGTGCTT TCTGCCGCGC
GAACCCGAGC GTGTGCCATT TCACCAGGCT GGCGAGAGCG ACACCGCCGG CGGCATTCGC
CATTTCGCGC AGGCACGGCG CTGGCGCATC GGCCGCGTTT CGCGTGCAAG CTGGGATTAC
CGGCGTCTGT CTGCACGTCC TGTGACGGCA TATGCGAGCG GGGCCGTGGT GCCTGGCGAG
GATCGCGACG TTGCCGGCCC GTACGCGTAC CAGACTGCCG CGGTCGGCGA GAAGCGCAGT
CAGCAGCAAC TCGACGCGCA GCGAGTCGAT GCGGCGACCG GCGCGGGTGA GGGGACGCGG
CGGGATTTGC GGCCGGGACT CCGGTTCTCC GTCGACGACC ATCCGGCCGT GGACGCTTCC
GATGCGTTCA TATGCCTGCG CGTGCAGCAT CATGCTCGGG CCAACGTGGC CGCCGACATC
CGCAGCGCGA TCGAACAGCA ATTGGGCTCC GTTCCCGCGA TGTCCGACAC CGGGAATGGC
GGCCTTGGCC TTGATTCGGC GCGGGACGGG GATGGATCTG AAGAGGATAC GACGACGGAG
TATGACGGGG TGTACCGGAA CCGCTTTCTG GCCATTCCGG CCGATCGTAC CTACCGGCCG
CTGCTGGAAC AGGGTCATGG CACCCGCTTG CATGCGGTCG CGATCGCACA CGGCGCACAA
AGTGCGATCG TGGTCGGCAG CGGCGACCCG ATCCACACAG AACGGGACCA CCGCATTCGC
ATCCAGCACC ACGCGCAGCG TGGCGAGCAG GCCGCGAGTC GCGAGCCGCA TCCGCACGCG
GCGAATGCGC CGGCGAATCG GAACGCCGGC ACGTGGACCC GTATGTTGAC ACCGGTGGCC
GGAGCGAACT GGGGCGGCGT GACGATTCCG CGCGTTGGCC AGGAAGTATG GACAGAGCTT
CTGGAAGGGC AGCCCGATCG CCCCGTTGCA GTTGCCGCGC TCTACAACGG ACAAGGCAAA
GTCGACGCGC AGCACAACGC ATTGGTCGGC GGCCCGAGCC GAAGCACGAG CAATGCCGCG
GCGTGGTTCG CAGGCAACGA TCATCCTGCG GTACTGACGG GTTTCAAGAC GCAGGACCTC
GGACAGAGCC AGACCGGCAC GGGCGGCTAT CGACAGTTCC TGCTCGATGA CTCGGCAGGC
CAGCCGCGCG CGCAGTTGTA CACGACCGAC CGGAACAGCG GGCTGACGCT CGGTCACATC
AAGCATCAGC AGGACAACCG GCGTCTCGCC GATCGCGGTT ACGGAATCGA GCTTGCTACC
GACGCCTCGG GTGCGCTGCG TGGCGGCGCG GGTCTGCTGA TCACGACGGC GACCGGCACG
AATCAGATGG ATGCGCGCGC GCCGGACCTG GACCTTGCGG AAGGAATGCA GCGCGTGCGG
GATCTCGCCG AAGCGGCACA AGGCGACGGG GCCGGCGTCG GTGCGTCGGG ACGGGAGTCG
CAGCCGGACC AGTTGGCGGC CGTTGCCGGG CTGAAGCAGA GCCGCGACGC ACTCGAGGCG
ACCCGCAGCG GCGGCGCGGC GACCGACGGC ATCGGCGGGG GCAGCGGCAG TGCAGTCGCG
TGGAGTCATC CGCACCTCGT CGCGCACGGC GCCGACGGTA TCGCGGCCGT TTCCGCGCGG
AGCCATATCT GGGTGTCGGG TAAGGAGACG GTGCTGAGTG CGGGGCAGGA CGTGCAGGTG
ACGGCCGACG GCAAGACCAG CGTGATCGCG AATCACGGCA TGTCGCTTTA TACCCAGGGC
CATGCGGCGA GCGGTCGGGC GGTCGAGGGC TCGGGTATTG CGCTGCATGC AGCGTCGGGC
TCGGCGAGTC TGCAGGCGCA GAACGGCGGG ACGTTGACCG CCGCCGCGCA GCGCGCGGTC
ACGCTTGCCA GCGTCGAGGC CGGCGCGATG GTGCAGGCGA AACAACGCCT GCTGCTGACG
GCAGCCGATG CCTTTCTCAA GATGGAGGGT GGCAACATCG TGGTCGGCGG ACCGGGGAAA
GTCGAATTCA AGGCGAGCAG CCATGTCATG ACCGGTCCGC AGAGCGCGTC GGGAGATGCG
ACGCTGGCCG GAAGCCACGC GAAGGATTGT CCGCAGACGA TGGGCGACAT GATCGCGTCG
AGCGCGGCCT GTGCGGATTT GTGA
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| Protein sequence | MATSKDILQA LLGGWTQHER FLQLTTPLGT DALAAECLEG WEAIDGGGFR FEITALSDNP
ALPIARLVGG PVLVEWPTTD GGGQRRPFHA HVAAAELVGY NAGLARIRLV LEPWLAMLRQ
RVDSYHFNDA SVIDISEQIF GYYTRGAVVP AWRWALADSE RYLRRSLTVQ AGESDFDFLS
RLWAEEGIYY WFEHTGDAQA KTLGGHTLVL ADSNACFLPR EPERVPFHQA GESDTAGGIR
HFAQARRWRI GRVSRASWDY RRLSARPVTA YASGAVVPGE DRDVAGPYAY QTAAVGEKRS
QQQLDAQRVD AATGAGEGTR RDLRPGLRFS VDDHPAVDAS DAFICLRVQH HARANVAADI
RSAIEQQLGS VPAMSDTGNG GLGLDSARDG DGSEEDTTTE YDGVYRNRFL AIPADRTYRP
LLEQGHGTRL HAVAIAHGAQ SAIVVGSGDP IHTERDHRIR IQHHAQRGEQ AASREPHPHA
ANAPANRNAG TWTRMLTPVA GANWGGVTIP RVGQEVWTEL LEGQPDRPVA VAALYNGQGK
VDAQHNALVG GPSRSTSNAA AWFAGNDHPA VLTGFKTQDL GQSQTGTGGY RQFLLDDSAG
QPRAQLYTTD RNSGLTLGHI KHQQDNRRLA DRGYGIELAT DASGALRGGA GLLITTATGT
NQMDARAPDL DLAEGMQRVR DLAEAAQGDG AGVGASGRES QPDQLAAVAG LKQSRDALEA
TRSGGAATDG IGGGSGSAVA WSHPHLVAHG ADGIAAVSAR SHIWVSGKET VLSAGQDVQV
TADGKTSVIA NHGMSLYTQG HAASGRAVEG SGIALHAASG SASLQAQNGG TLTAAAQRAV
TLASVEAGAM VQAKQRLLLT AADAFLKMEG GNIVVGGPGK VEFKASSHVM TGPQSASGDA
TLAGSHAKDC PQTMGDMIAS SAACADL
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