| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1775 |
|---|
| Symbol | |
|---|
| ID | 6123446 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 1979083 |
|---|
| End bp | 1979661 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641638351 |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_001765065 |
|---|
| Protein GI | 170733118 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTCCA TTCACCTCAG TTTCGACGAC GGCCCCGGCC CCTCGACGCC CGCGCTGCTC
GATGTGCTGC GCGACGCCTC GTGCTCGGCG ACCTTCTTCG TGCTCGGCAA GCATCTGGCG
GACGCACCCG ACGTCGCGAC GAGAATCGTG CGCGACGGCC ACCGGCTCGG CAACCACACC
TATTCGCACG CGAAACCGGG CGCGCTCGCC GACGCCGCAC TGATCGACGA GATCGACGCG
ACCGACGCGC TGATTCGCGA CGTCTACCGC CGCGCCGGCC TTCCCGCACC GAACGCGATC
CCGCTGCGCC TTCCGTACGG GTTGATGCCG CGGGACGATC GCGCCGCCGT GCTCGCGCGC
CTGCCCCGCG AACACACGGG CTGGACCGCG ATCCTGTACG ACTGGCAGCG GCCGGCGCCG
TCGCCGCAGG CGCTGTTCGA CGCGATGTGC GCGCATGTCG ACGCGTGCAC GGCACAGCAT
CGCGACGTGC TGTTCTGCCT GCACGACGGA TCGCGGCACG GCGATGCGCG GCCCAACACG
GTCGAGGCCG TGCGCCTGCT CCTGAACCGG CAGCGCTGA
|
|---|
| Protein sequence | MISIHLSFDD GPGPSTPALL DVLRDASCSA TFFVLGKHLA DAPDVATRIV RDGHRLGNHT
YSHAKPGALA DAALIDEIDA TDALIRDVYR RAGLPAPNAI PLRLPYGLMP RDDRAAVLAR
LPREHTGWTA ILYDWQRPAP SPQALFDAMC AHVDACTAQH RDVLFCLHDG SRHGDARPNT
VEAVRLLLNR QR
|
|---|
| |