| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1570 |
|---|
| Symbol | |
|---|
| ID | 6123246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 1732841 |
|---|
| End bp | 1733899 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641638151 |
|---|
| Product | permease |
|---|
| Protein accession | YP_001764865 |
|---|
| Protein GI | 170732918 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0701] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.993908 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCA CACGCACTCA ACCCAGTCCG GCCCTCGGCT GGATGACCTT CCTGCTGATC
GCGGTCGCGG GACTGTTCTA TGTGAAATGG TTCCCGTACT ACAACAAGGC GTTCGTTGCC
GCCGAGCACC ATTCGATCGG CCAGTCGATC CTGATGGGCA CGTCGGCGGC CGCGCCCGAG
CCGTCGCTGA AGGCGGCGCT CGACTACGCG TGGGCATACG GCAAGGCGAT CTGGCAGGCG
ATGGTGCTCG GCCTGCTGCT CGGCTCGGCC GTGCAGGCGC TGCTGCCCGC GCACTGGGTG
GCGCGTGTGC TCGGCCGCAC GGGGTTCGGC AGCGTCGCCG CGGGCGGGCT GCTGTCGCTG
CCCGGGATGA TGTGCACGTG CTGCGCGGCG CCGGTCGTCG CGGGCCTGCG GGCGCGCCAC
GCGTCGCCGG GCGGCGCGGT CGCGTTCTGG CTCGGCAACA CGGTGCTGAA CCCGGCGGCG
CTGGTGTTCA TGGGCTTCGT GCTCGGCTGG CACTGGAGCG CGCTGCGCCT CGTGCTCGGC
ATCGCGATGG TGTTCGGGAT CGGCTACCTG CTGAACCGCA TCGCGCGTCC CGAAGACCGC
AGCATCGACG ATGCGCAGCT CGCCGCGCTG GCAGCCGAGC AGGCCGCGGC CGGCAATCCG
TTCGTCCGCT GGATGAAGCT GCTCGCGCGC ATGGCCGTGC GGCTCGTGCC CGAATACATC
GTGCTCGTGC TGCTGCTCGG CGCCGCGCGC GCGTGGCTGT TCCCGCATAT CGGCCCGGAC
ATCGGCAATC ACCTCGGCTG GATCGTCGCG TTTGCGGTCG CGGGCATGCT GTTCGTGATC
CCGACGGCCG GCGAGGTGCC GATCATCCAG GCGATGCTGT CGCTCGGCAT GGGCGTCGGT
CCGGCCGCCG CGCTGCTGAT GACGCTGCCG CCGATCAGCG TGCCGTCGCT CGCGATGCTC
GCGCGTTCGT TCAAGCCTTA CATGCTGGCG ATCGTCGCGA CGCTCGTCGT CGTATTCGGG
ATCGTGAGCG GTTTGCTTGC GATCGCGTTC GGGTTCTGA
|
|---|
| Protein sequence | MTTTRTQPSP ALGWMTFLLI AVAGLFYVKW FPYYNKAFVA AEHHSIGQSI LMGTSAAAPE
PSLKAALDYA WAYGKAIWQA MVLGLLLGSA VQALLPAHWV ARVLGRTGFG SVAAGGLLSL
PGMMCTCCAA PVVAGLRARH ASPGGAVAFW LGNTVLNPAA LVFMGFVLGW HWSALRLVLG
IAMVFGIGYL LNRIARPEDR SIDDAQLAAL AAEQAAAGNP FVRWMKLLAR MAVRLVPEYI
VLVLLLGAAR AWLFPHIGPD IGNHLGWIVA FAVAGMLFVI PTAGEVPIIQ AMLSLGMGVG
PAAALLMTLP PISVPSLAML ARSFKPYMLA IVATLVVVFG IVSGLLAIAF GF
|
|---|
| |