Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1501 |
Symbol | |
ID | 6123179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 1665431 |
End bp | 1666429 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641638079 |
Product | type II secretion system protein |
Protein accession | YP_001764798 |
Protein GI | 170732851 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2064] Flp pilus assembly protein TadC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000870782 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGATGCAA ACCGTTTAGG CGCGCTTGCG CTGGTGCTCG GATCGGTCGG CGTGCTGCTG CTTGCCGCGC TCGCGATCGT TCGCATCGTG CTCGTGCAGC GTGCCGAGCG CGCGCTGTTG CATGCGCTCG ACCGCCGGGC CGCCGCAGTC GAAGCGGCCG CCGCGCGTGC CGGCTCCGCC GACGCGGCGC GCGAGGCAGC GGCACCTGTC GCGCCGCGGG TTCGCTTCGC GAGGCTGCGC GAACGTTTCG AAGACGTCGG GATGCGGTGG CTCGATACCG GTTTCAGCCG ATATCTGATC GCCGACGAAG ACCGTCGATT GCTCGAGCAG TGCGGTTTCG TCGACGTGCG CGCCAGAGCG CTGTTCGTCG GCGCGCGCAT CGTCTGCGCG ATCCTGCTGC CGGCGCTGGC CGTGCTGGTA CTGATCGGCC GCGGACAGCA AGCGCGCTGG CCGTTGTGGC TCTCCATCGC GCTCGTGACC GGCTACATGC TGCCGAAAAT CTACGTGCGG CGGCGCGCGA CCGCGCGTCG ACAGAGCCTT GGGGCCGAAC TGCCGCTGCT CGTCGACATG TTGCGGCTGC TGCAGGGCGT CGGCCTGTCG CTCGACCAGA GCATCCAGGT GGTCACACAC GATTTTCAGA CGATGTTGCC GGTGCTGTCG TGGGAGCTCG GCGTCGCGCA GCGGCAGTTC GCGGCCGGAC GTACGCGCGA GCAATCGCTG CAACGCCTCA CGAACAGTTT CGACAACGAG GATCTGCGCG CGATCGTGCG CTTGCTGATT CAGGTCGACA AGCATGGCGG CGCGGTGCAG GAGCCGCTGA AGCAATTCGG CGACCGTCTG CGTGAAGGGC GTCGCGCGAC GCTGCGCGAG CAGATCGGCC GCCTGACGGT GAAGATGACC GGCGTGATGA TCGTCACGCT GTTGCCGGCA TTGTTGATCG TGACCGCGGG GCCGGGGATC ATGACCGTGC TGTCCGCGCT CGCTGCGTTT CAGCGCTGA
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Protein sequence | MDANRLGALA LVLGSVGVLL LAALAIVRIV LVQRAERALL HALDRRAAAV EAAAARAGSA DAAREAAAPV APRVRFARLR ERFEDVGMRW LDTGFSRYLI ADEDRRLLEQ CGFVDVRARA LFVGARIVCA ILLPALAVLV LIGRGQQARW PLWLSIALVT GYMLPKIYVR RRATARRQSL GAELPLLVDM LRLLQGVGLS LDQSIQVVTH DFQTMLPVLS WELGVAQRQF AAGRTREQSL QRLTNSFDNE DLRAIVRLLI QVDKHGGAVQ EPLKQFGDRL REGRRATLRE QIGRLTVKMT GVMIVTLLPA LLIVTAGPGI MTVLSALAAF QR
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