Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1427 |
Symbol | |
ID | 6123105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 1581991 |
End bp | 1583508 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641638003 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_001764724 |
Protein GI | 170732777 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGTT GCGCGAGCAT GGGCGACAAC AAAACCCAGT CCACTCGCAT CGAAGCGAAC GCGCTCGACG CCGGCGCGGC CATCCGCGCG GCCGACCGAG ACGCGGGCTG GCCCGCCGCC GACTGGTGGC GCGCGTACCG CGATCCCCAG CTCGATGCAT GGATCGCCGC CGCCCAGGCC GGCAACCCGA CCCTCGCGGC CGCCGAGGCC CGCGTGCGCG AAGCGCAGGC GATGGCGCGC GTCGCCCGCT CGGCCGAACT GCCGCAGATC AACGGCAACC TGTCGCTGAT GCGCCAGCAC TGGCCGGACA ACGTGTACTA CGGCCCGGGG CCGCTCGCGA ACGCCGATAC CTGGAACAAT ACCGGCTCGC TCGGCCTGTC GTACCACCTC GATCTGTGGG GCAAGGACAA GAACGCGACC GAGCGGGCGC TCGACACCGC GCATGCGACC GCCGCCGACG CGCGTGCGGC CAAGCTCGAA CTCGAAGTCA ACGTGGTGCG CGCGTATGTC GGCATGTCGA TGAACTACGC GCTGCTGGAC CTCGCGCACG AGACGTTCGA ACGCCAGCGC TCGCTCGCCG ATCTCGCACG CAAGCGGCTG CAGGCCGGCC TCGGCACGCA GCTCGACGTG AGCCAGGCGG AATCGACGCT GCCCGACTAC GAGCGCCAGA TCGACAGCTA CGAAGAGGCG ATCCAGCTCG CGCGCCACCA GCTCGCCGCA TTGGCCGGCA AGGGCCCGGG CGCCGGCGAC ACCATCAAGC GGCCGCAGCT TGCGCTCGAT GCGCCGGCCG GCCTGCCGTC GGCGATGCCG GCCGACCTGC TCGGCCGCCG CCCCGACGTC GTCGCGGCGC GCTGGACGGT CGACGCGCAG GCGCGCGGGA TCGACGTCGC GAAGGCGTCG TTCTACCCGA ACATCGACCT GCTCGCGACG GTCGGCGGCT TCGGCGTGAC CGCGCCGTTC ACCGACTTCC TGCGCGCGAT GAACGGCGGC TGGACGGCCG GCCCCGCGCT GTCGCTGCCG ATCTTCGAAG GCGGCCGGCT GCGGGCGCAG CTCGGCGCCG CGAACGCCGG CTACGACCAG GCGGTCGAGC GCTACAACCA GACGATCGTC GGCGCGCTCA AGGACATCGC CGACCAGGTC GTGCGAATCC GCTCGCTCGA TACGCAGAAG AAGGACGCCG CGCGCTCGGT GGCGGCCAAC AATCGCAGCT ATCAACTGTC GCGTGAAGGC TTCCGCCGCG GGCTGACCGA TTACGTGAAC GTGCTGGTCG CCCAACAGCA ACTGCTGCGC GCGCAGGAGA CGGCCGCCCG CATCGACGCG GAACGCCTCG CCGCGCATGC GCAGTTGATG GCCGCGCTCG GGGGTGGGGT CGAGACGGGC AGCGACGTGC CGAAGGACGA AGCCGCCGCC GCGGTTGCCG CGCCCGCCGC CGCGTCGGGC ACGAAGCCCG CGGCAGCCGT CGCCCGGCCG GCGGAAGTCG CCACCACCGG CGCGTCCGGC GTGCCGGCCG CACGGTAA
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Protein sequence | MAGCASMGDN KTQSTRIEAN ALDAGAAIRA ADRDAGWPAA DWWRAYRDPQ LDAWIAAAQA GNPTLAAAEA RVREAQAMAR VARSAELPQI NGNLSLMRQH WPDNVYYGPG PLANADTWNN TGSLGLSYHL DLWGKDKNAT ERALDTAHAT AADARAAKLE LEVNVVRAYV GMSMNYALLD LAHETFERQR SLADLARKRL QAGLGTQLDV SQAESTLPDY ERQIDSYEEA IQLARHQLAA LAGKGPGAGD TIKRPQLALD APAGLPSAMP ADLLGRRPDV VAARWTVDAQ ARGIDVAKAS FYPNIDLLAT VGGFGVTAPF TDFLRAMNGG WTAGPALSLP IFEGGRLRAQ LGAANAGYDQ AVERYNQTIV GALKDIADQV VRIRSLDTQK KDAARSVAAN NRSYQLSREG FRRGLTDYVN VLVAQQQLLR AQETAARIDA ERLAAHAQLM AALGGGVETG SDVPKDEAAA AVAAPAAASG TKPAAAVARP AEVATTGASG VPAAR
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