Gene Bcenmc03_1377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1377 
Symbol 
ID6123055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1521226 
End bp1521924 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content71% 
IMG OID641637953 
Producthypothetical protein 
Protein accessionYP_001764674 
Protein GI170732727 
COG category[S] Function unknown 
COG ID[COG3619] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.343918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.236805 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCACG AGGACACGAT TCTCGCCGCG GTGGCCGGCT TCGTCGATAC GCTGAGCTTC 
GTCGCGCTGT TCGGGCTGTT CACCGCGCAC GTGACCGGCA ACTTCGTGCT GATCGGCGCG
GGCATCGCGG GCTTCGGCCA GGGCGTCATA CTGAAGCTCA GCGTGTTTCC GGCTTTCGTG
TGCGGCGTGA TCGCGAGCAG CCTGATCGCG CGGTCGATGG CCGCGCGACC GGCCTGGCAG
GGCACGCGCG TGCTGCACAC GGTGCAGGCC GTGCTGCTGC TCGGCTTCTG TGCGGCCGGC
GTGTGGGCGA CGCCCGTCAC GCAGCCTGAC AGCCTGGCGG CGCTCGTGGC CGGCATCGTC
GGCACGTTCG CGATGGGCGT GCAGAATGCG CATCCGCGCG TGATCGCCCG CGCGGGCGGC
GTGCCGAATA CGGTGATGAC CGGCAACGTC ACGCAGGCGA TCCTGGATGC GGTCGACATC
CTGTCGCCCG GCACGGCGGA CGGCGTGCGC GCCACCGCGC GCGCACGCTT CGCGAAGATG
CTGCCGGCGA TCGTCGCGTT CGCGCTCGGC GCGGCGGGCG GTGCGCTCGG GTTTCGCTAT
ATCGGATTCC TGGCGCTGCT GGTGCCCGTC GGCGCGCTCG CGACGCTCGC GCTGTGCGCG
GCGCAATCAG CCGGCACCAC CACGCAGGAG CGCGCATGA
 
Protein sequence
MKHEDTILAA VAGFVDTLSF VALFGLFTAH VTGNFVLIGA GIAGFGQGVI LKLSVFPAFV 
CGVIASSLIA RSMAARPAWQ GTRVLHTVQA VLLLGFCAAG VWATPVTQPD SLAALVAGIV
GTFAMGVQNA HPRVIARAGG VPNTVMTGNV TQAILDAVDI LSPGTADGVR ATARARFAKM
LPAIVAFALG AAGGALGFRY IGFLALLVPV GALATLALCA AQSAGTTTQE RA