Gene Bcenmc03_1369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1369 
Symbol 
ID6123047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1513835 
End bp1515415 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content71% 
IMG OID641637945 
Productsodium/hydrogen exchanger 
Protein accessionYP_001764666 
Protein GI170732719 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID[TIGR00831] Na+/H+ antiporter, bacterial form 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0185276 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACG TCGAGCTGTT CCATTACCTG TTGCTGTTGA TCTGCGGCGC GGGCGCCCTC 
ACCTGGCTCG CCGAGCGCCT GTCGATTCCG CCGGCCGTCG TGCTGCTGCT CGGCGGCTGC
GTGGTCGCCG TCGCCGGCAA GCGCGTGCCC GACATGGACC CGGCGCTGCT GCTCGCGGCC
GTGCTGCCAC CGCTGTTGAT GTCGAGCGGG TTCTACACCG CGTGGAAGGA ATTCCGGCAG
GAGCTCGCGT CGATCGCATC GCTCGCGCTC GGGGCCGTGG CGTTCACGAC CGTCGCGGTC
GCGCTCGCCG TGCATGCGGC GAATCCCGCG CTGCCGTGGG CCGCGTGCTT CACGCTCGGT
GCGATCGTGT CGCCGCCCGA CGCGGTCGCC GCGAAGGCGA TCCTGCAGCG CCACCCGCTG
CCCGCGCGGC TCGTCGCGGT GCTCGAAGGC GAAAGCCTCG TCAACGATGC GTCGGGCCTG
CTGCTGTACC AGATGGCCGT ATCGGCCGCG CTCGCCGCCA CGATCACGAC CGCGAGCGCG
ACCGGCCTGT TCTTTTCGCT CACGCTGATC GGCATCGCGG TCGGCCTCGC GTGCGGCCAT
GCGATGTGCT GGGTGCTGCA GCGCCTGCGC GAACCGATGC TCGGCATCGT CGTGACGTTC
GCGATGGCAT GGGGCAGCTA CGGGATCTCG GAAGCCGTCG ACGGCTCAGG CGTGCTGTCG
GTCGTCACCT GCGGCCTCGT GCTCGGCGTG CGCCAGCATC GCGTGTTCGG CGCCGACATG
CGGATCAAGG CGAAGGCGAC GTGGGAAGCG ATCGTGTTCG TGCTCGACGC GCTCGTGTTC
ATCCTGATCG GCCTCGCGCT GCACGCGATC CTCGCCGGCG TGAACCACGA AGGCGCGGTG
CTGATGGCCG GCCTGCGGGT CGCACTGCCC GCGACGGCCG CCGCGATCGG CGCGCGCGTG
GTGTGGGTAT TCGTCGCGAT GTGGCTGCCG GGCCGCCTGC GCGCGCGGCG CGCGGGCCAC
GCGGCGTGGT CGTGGCGCGA AGCCGTCGTC CTCGGCTGGT CGGGCATGCG CGGCGTCGTG
AGCCTCGCGG CCGCGATTGC CCTGCCGGCC AACTTCCCCG GCCGCGACCT GATCCTGTTC
AGCACGTTCC TGCTGATCAT CGCGACGCTC GTCGTGCAGG GCGGCACGCT CGCGCCGCTG
ATCCGCGTGC TGAAGCTGCG CCCGGCCGCG CGCCGCACGA TGTCCGAACA TGCGGTGCGT
GCGCATACGT TCGGCGCGGC GCTCGCCGAG CTCGATGCGC GCGAGCAGCG CGGCGCCGGC
CTCGAACGCG CGTCGCTCGA CCGGCTGCTG ACCGAATACC GGAGCCGCGT CGCGTTCAAC
GAGCACGCAC ATCGCGACGG CGCGGCGCCC GCGGACGTGC GCGCGCGGAT GCTGCGCGTC
GAGCTCGAGC TGGTCGGCGT GTCGCGCGAC GCGTTGCTCG ACCTGCATCG TGACGGCCGG
GTCGACGACG CGGTGCTGCA CCGCATAGAA TCGGAGCTCG ATTTCGAGGA GCTGCGGCTG
CAGCGCCTGC TCGAACCTTA A
 
Protein sequence
MTNVELFHYL LLLICGAGAL TWLAERLSIP PAVVLLLGGC VVAVAGKRVP DMDPALLLAA 
VLPPLLMSSG FYTAWKEFRQ ELASIASLAL GAVAFTTVAV ALAVHAANPA LPWAACFTLG
AIVSPPDAVA AKAILQRHPL PARLVAVLEG ESLVNDASGL LLYQMAVSAA LAATITTASA
TGLFFSLTLI GIAVGLACGH AMCWVLQRLR EPMLGIVVTF AMAWGSYGIS EAVDGSGVLS
VVTCGLVLGV RQHRVFGADM RIKAKATWEA IVFVLDALVF ILIGLALHAI LAGVNHEGAV
LMAGLRVALP ATAAAIGARV VWVFVAMWLP GRLRARRAGH AAWSWREAVV LGWSGMRGVV
SLAAAIALPA NFPGRDLILF STFLLIIATL VVQGGTLAPL IRVLKLRPAA RRTMSEHAVR
AHTFGAALAE LDAREQRGAG LERASLDRLL TEYRSRVAFN EHAHRDGAAP ADVRARMLRV
ELELVGVSRD ALLDLHRDGR VDDAVLHRIE SELDFEELRL QRLLEP