| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1303 |
|---|
| Symbol | |
|---|
| ID | 6122981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 1431102 |
|---|
| End bp | 1433276 |
|---|
| Gene Length | 2175 bp |
|---|
| Protein Length | 724 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641637879 |
|---|
| Product | TonB-dependent siderophore receptor |
|---|
| Protein accession | YP_001764600 |
|---|
| Protein GI | 170732653 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACGA GAATAGACCA CCCGCGCGCG CGGCGCGCGG CGACGGGACG ATGCAGCGGT
GCCCCGCTCG CCTTTTCGGC ACTGTGCCTC GCCTCCTCGT GGGCGAACGC GCAAGGCACG
CCCGCTCCGG TCGGCGACAT GCTCCCCGTC TTGACGGTGG TGGGCACGCG GGACGCCGAT
GCGACCACCG AAGGCAGCGG CAACTACGCG TCGAAGTGGG CCACCATCGG CGGAAAAGTC
GCGCAATCGA TCAAGGAGAC GCCGAACTCG GTCTCGGTGC TCACGCGCGA GCGGATGGAC
GATCAGAACA TCACGACCAT CCAGCAGGCG TTGCGCTCCG TGACCGGCGT CAGTTCGATC
GACTACGGCG ACGGTACCGC GTACTTCCGC GCGCGCGGTT CGCAGCTCGG CATCGAATTC
GACGGGGTCC CGACGCTGAG CGGCCTGCAG TACCAGTTGC AATTCGATCT GGCGATGTAC
GACCGCGTCG AAATCCTGCG CGGCCCGGCA GGCTCGATCG ATGGCATGGG CGAGCCGGGC
GGCGTCGTCA ATCTCGTGCG CAAGCGCCCT CAGGATCAGT TCCACGTCGC CACGGAAACG
CAGGTCGATT CGTTCGGCAG CGTGCGCCAG ATGATCGACG TCACCGGGCC GCTGAACAAG
GACGGCACGC TGCGCGGACG CGCCGTTCTC GTGGGCAGCA CCGGCACGCA ATCGATAGAG
CGCACACGCA GCAAGGAGAT GATGGCCTAT GCTGCGCTCG ATTGGGACCT CGCGCCGCGC
ACGACGCTGT CGCTGTCGGG CGGCTATCAG GTCTCGCCGA TTTCCGGCAT CGACTACGGT
GCGGGCGGCG TGCTGAACAG CACGCGTACC GCGCTCACCG GGCGCGTGCC GAGCGACTAT
ACGCGGAACT TCAGCCCGAG CTGGAACTAC GCGTACACCT CGTTGCAAGA GGTCAACGCC
AACCTCGTGC ACCGGTTCGA CAGCGCGTGG CAAGCCTCGA CCACGCTGTT CTACCGCCAC
GAACTCTCCA AGGCCTACTA CGCGTACTCC GGCCCCGGCG CGACCGCAAA TGGCCTCGCG
CGCTTCGGAG ACCAGCGGCA GCGCACGAGC TACGACTGGT TCGGCGCGGA CACCAACGTA
TCCGGCCCGG TCCGACTCTG GGGGCAAACG CATACGCTGA CCATCGGCGC GAACTACGCC
GTGATGACAT CGGGCGCGCA ATCGGGTTAC CGCGCGTTGA GCGGCCCGTA CGGCGGCGCC
TACAGTCTCT ACGATCCCAA TGCGGTGCCC GCCGTGGACG TACCGTACAC GTTCGGCACC
AATCACCGCA CCGTGCAATA CGGCGTCTAT GCGCAGGCGC GGATCAAGCT CGCCACGCCG
CTGACGCTCG TGCTCGGCGG CCGCGAGGCG TTCCTGCAGG ATCGCACGCA GTCGACGTTG
CCGAGCGTCG CGGACTGGAC GACCAACGCG CAGATCAATC ATCGCTTCCT GCCGTCCGCC
GGCCTGCTGT GGGACATCGT GCCGTCGCTG ACGGCCTATG CCAACTATGC GCGTTTCCTC
GATGCGCAAA CGCAAGGCAC GTACTCGGGG CCGGGCCTGC CGCCCCGCTC GGGAGAGCAG
TACGAAGTGG GCATAAAAAG CAGCCTGCTC GATGGCCGCC TGAACGCGAA CGCTGCGTTG
TTCCGCATCA ACGACGACAA CCGCGCCGTT GCCGATCCTG CCCATCAGTT CTATTACGTA
TCCGCAGGCA AGGCCCGCAA TCAGGGGATC GAGCTCGAAC TCACCGGCCA GCCGACGCCG
GACTGGAACC TCTATGCTGG CTACACGTAT CTGAACGCGC ACTACGAGAA CGACTCGCCC
GATCTCACCG ACGGCACGGA TCCGAAGCAT CTGTTCAAGC TGTGGACCCG ATATACGCTC
TCGCAGGGTC CGTTGCGCGG ATTCTCGATC GGCGGCGGCA TGCTCGCGCA AACGCGTATC
TCGCGCGGCG TCGAACAGGG TGGCTATGCG GTGTTCGACG CACAAGCGGG ATATCGTTTC
AACAAGCACG TGATGGCGTC GTTGCAGTTG AATAACGTGT TCAATCGCAG GTACTACATT
CGCCCGCCCA GCACCTATTA CAGCGTATTC GGCGACGCGC GCAACGTGAT GTTGACGGTG
CGCTCGGACT TCTAG
|
|---|
| Protein sequence | MTTRIDHPRA RRAATGRCSG APLAFSALCL ASSWANAQGT PAPVGDMLPV LTVVGTRDAD
ATTEGSGNYA SKWATIGGKV AQSIKETPNS VSVLTRERMD DQNITTIQQA LRSVTGVSSI
DYGDGTAYFR ARGSQLGIEF DGVPTLSGLQ YQLQFDLAMY DRVEILRGPA GSIDGMGEPG
GVVNLVRKRP QDQFHVATET QVDSFGSVRQ MIDVTGPLNK DGTLRGRAVL VGSTGTQSIE
RTRSKEMMAY AALDWDLAPR TTLSLSGGYQ VSPISGIDYG AGGVLNSTRT ALTGRVPSDY
TRNFSPSWNY AYTSLQEVNA NLVHRFDSAW QASTTLFYRH ELSKAYYAYS GPGATANGLA
RFGDQRQRTS YDWFGADTNV SGPVRLWGQT HTLTIGANYA VMTSGAQSGY RALSGPYGGA
YSLYDPNAVP AVDVPYTFGT NHRTVQYGVY AQARIKLATP LTLVLGGREA FLQDRTQSTL
PSVADWTTNA QINHRFLPSA GLLWDIVPSL TAYANYARFL DAQTQGTYSG PGLPPRSGEQ
YEVGIKSSLL DGRLNANAAL FRINDDNRAV ADPAHQFYYV SAGKARNQGI ELELTGQPTP
DWNLYAGYTY LNAHYENDSP DLTDGTDPKH LFKLWTRYTL SQGPLRGFSI GGGMLAQTRI
SRGVEQGGYA VFDAQAGYRF NKHVMASLQL NNVFNRRYYI RPPSTYYSVF GDARNVMLTV
RSDF
|
|---|
| |