Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1281 |
Symbol | |
ID | 6122959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 1406086 |
End bp | 1407375 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641637855 |
Product | integrase family protein |
Protein accession | YP_001764578 |
Protein GI | 170732631 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0441454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGCAAA AATTCAAAAT TGACCGTGAC TTCCTCCGGT CTATACAACC TACGGGGAAG TACCAAGAAT TCGTCGATTT CGAGGTTCGG GGGTTCGGCG TGAAAGTGAC GCCGACCGGA ACCGTCACGT ATACGGTGCG ATGGACGAAG CCGGACGGAA AGCAGGGCCG GAAGGTTGTC GGCTACTGGC CGAACATGAA TCCCGGCGAG GCGCGCGAGC TCGCCCGAAA GACCATCCGG GATGTCGACA AAAAGGGCGA CACGACGGCG GACGTACTGG AGCGCCGACG CCGCCAGGTC GAAGCGCAGC AGATAGTCAG CGGCCATACG TTGCGGGATT TCATCGATAC GCGGTATCGG GTATGGATGA TCGCCAACAA CCGCAGCGGC GAGGCAACCG TCACGCGCGC GGTTCGTGTG TTCGCGGATT TTCTCGATCA CCCGCTGAAC GGCTTTAATC CGTGGATGTT CGAAAGTTGG CGTGCGAAGT GCCTCGACAA AGGCTTGAGC ACGGCGACGA CGAACCGGGA TCTCGCTGCG CTTCGCGGCC TGTTTTCTCG CGCCGTCGAA TGGGGTGTGG TTGCCGAGCA TCCAATGCGC ACCGTCAAGG CTCTGAAGGA ATCGAGCGGA AAGGTGCGCT GGTTATCCGA TGACGAAGAG GATCGGCTCC GGATCGCACT GGATGCCCGT GAAGAGCGGG AGCGATCGGC ACGCGACAGT GCGAACGTCT GGCGGAAAGC GCGGGGCTAT GAGCTGCTGG AGGATTTGCG AACGGTGCCT TTCGTTGACT ATCTGAAGCC GGCCGTACTG CTGTCGCTGA ATACGGGAAT GCGGCAAGGG GAGTTGCTGA AGCTTCGATG GGGGCGAGTC GACCTTGAAA ATTCCATTCT GACTGTATCG GACGAAACGG CTAAGTCAGG AAAGCAGCGT CATATTCCGC TGAACGACGA AGCGCTCACG GCGCTGAAGC AATGGCGTCA GCAGCAATCA CGGTTCGATG TCGTATTTGC AGGCGACAGT GGTGCTGTAC GGACCGACGT AAAAACCGCG TGGGCGCGCC TTCTCAAAGA CGCACAAATT CAGGATTTTC GATGGCATGA CATGCGGCAT CACTTCGCGT CGCGTTTGGT GATGGCGGGC GTCGACCTAA ATACCGTGCG CGAGCTGCTC GGGCATTCGG ATATGACGAT GACGCTCCGA TATGCGCACC TGGCCCCGGA GCACAAGGCG GCTGCCGTTG CAAAGCTCGG GAGGCGAACC CCTGTCGTGC CGGATGGTGC AAATGCCTGA
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Protein sequence | MRQKFKIDRD FLRSIQPTGK YQEFVDFEVR GFGVKVTPTG TVTYTVRWTK PDGKQGRKVV GYWPNMNPGE ARELARKTIR DVDKKGDTTA DVLERRRRQV EAQQIVSGHT LRDFIDTRYR VWMIANNRSG EATVTRAVRV FADFLDHPLN GFNPWMFESW RAKCLDKGLS TATTNRDLAA LRGLFSRAVE WGVVAEHPMR TVKALKESSG KVRWLSDDEE DRLRIALDAR EERERSARDS ANVWRKARGY ELLEDLRTVP FVDYLKPAVL LSLNTGMRQG ELLKLRWGRV DLENSILTVS DETAKSGKQR HIPLNDEALT ALKQWRQQQS RFDVVFAGDS GAVRTDVKTA WARLLKDAQI QDFRWHDMRH HFASRLVMAG VDLNTVRELL GHSDMTMTLR YAHLAPEHKA AAVAKLGRRT PVVPDGANA
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