| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1055 |
|---|
| Symbol | |
|---|
| ID | 6122735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 1160666 |
|---|
| End bp | 1161418 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641637625 |
|---|
| Product | AzlC family protein |
|---|
| Protein accession | YP_001764354 |
|---|
| Protein GI | 170732407 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
|---|
| TIGRFAM ID | [TIGR00346] 4-azaleucine resistance probable transporter AzlC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0170281 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.980601 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAACAAGA CACCCGCATC ACCCCCGCGC CGCCCGCTCA ACGAATGGCT CGACGGCGCG
CGCGACACGA TCCCGATGAT GATCGGCGCC GCGCCGTTCG GCGTGATATT CGGCACGCTC
CTCGGCGGCG GTCCGCTCGC CGCCTGGCAC GGCGCACTGA TGTCGCTCGC CGTGTTCGCG
GGCTCCGCGC AATTCATCGC GCTCGGCCTG ATCGCCGGCA GCGCCAGTTT CGTCGTCGTG
CTCGCCACGA CGCTGATCGT GAACCTGCGC CACCTGCTGT ACAGCGCGAC GCTCGCGCCC
TATGTCGCCC ACCTGCCGCT GCGCTGGCGC GCGACGCTCG GCGCGTTGAT GACCGACGAG
GTGTTCGCGG TCGCCTACGG CCACTACCGG CACTACCCGC CCGGCACGAT CGGCCCCCAC
TACTTTTTCG GCTCCGGGCT CGCGATGTAC CTGAACTGGC AGGTCTGGAC GCTCGCGGGC
ATCGGCTTCG GCGCAGCGTT CCCCGGCCTG CAGTCGCTCG GCCTCGATTT CGCGATGGCG
GCGACCTTCA TCGCGATCGT CGTCCCGCAG CTCGGCACGC TGCGCTATTT CGCGGCGGCG
GCCACGGCCG GCACGCTCGC GTACTTCTGG CAGGGCTGGC CGTACAAGCT CGGGCTGCTC
GGCGCGGTCG CCGCCGGCGT CGCGATCGGC GTCGTGCTCA CGCTGCGGCA CGATCGCACG
CACGCCAACG CTCGTTCGAA GGCCGCATCG TGA
|
|---|
| Protein sequence | MNKTPASPPR RPLNEWLDGA RDTIPMMIGA APFGVIFGTL LGGGPLAAWH GALMSLAVFA
GSAQFIALGL IAGSASFVVV LATTLIVNLR HLLYSATLAP YVAHLPLRWR ATLGALMTDE
VFAVAYGHYR HYPPGTIGPH YFFGSGLAMY LNWQVWTLAG IGFGAAFPGL QSLGLDFAMA
ATFIAIVVPQ LGTLRYFAAA ATAGTLAYFW QGWPYKLGLL GAVAAGVAIG VVLTLRHDRT
HANARSKAAS
|
|---|
| |