Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0862 |
Symbol | |
ID | 6122543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 961133 |
End bp | 962389 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641637426 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_001764162 |
Protein GI | 170732215 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGAAGC GCTTCGGCAA CCCGGATGTC GCGAAGGCCG TCGCGAACCT CGTCTGGCTG GGGCTCGAAC GGCTTACGCA AATCGGCGTC GCGATCGCGA TCAGCGGCCT GCTGGCCCGT TATTTCGGGC CAGATGTGTT CGGCAAATGG CAGTATGCGA ATACGCTTCT CCTGGTACTG GCGCCGCTCA CCTGGGTGTG CGGCGCGGAA ATCCTCGTCC CCACCATCGT CCAGCGCCCG CCCGCGCAGC TCGGCGCCGT GCTCGGCAGC GCGTTCGTGC TGCGCATCGC CGTATCGGTC GCCGCGCTCG CCGCGACCTG GGTCGCGATC GCCGCGGGCG CCTTCGACCC GCTGGTCGGC GCGATGCTCG CCGGCCTGGC CGTCACGATG GTGTTCCGCG AGCCGTTCGT CGGCGTAATC AACGCGTGGC TGCAGAGCAT GACCTACAGC AAGCCGCAGC TCGTCACCAG CATGCTCACC GCGCTCGCCA AGGCGCTGCT CGTCTGGCTC CTGGTGCGCG CGGCCGCCGG CCCCGCCCGC TTCGCGTGGC TGTGGGCGCT GGAAGCCGCC GCGATCGGCC TCGCGCTGCT GCTGTACTAC CGCCATCGTA ACGGCGGCGC GCTCGGCTGG ACGTTCGACA AGCCGCTGTT CCGGCACTTT GCCACGGCCG GCACCGTGTT CTGGCTCGGC CTCATCTGCA TGTACCTGTT CCTGAAGCTC GACCGCCTGA TGCTCGAGCG TCACGTTTCG TTCGCCGATC TCGGCCGCTA TTCGGCCGCG CAGCAGCTCA ACGAGAACTG GATCACGCTC GCGCTGATGC TCGCGCAGAC CATCGCGCCC GCGTTCGTCT ACCGCGTGCA GGACGTCGCG CGGCTGCGCC GCAACATCGT CCGGCTGATC GCGATGACGG CCGGCCTGAT GACGGCCGGC GCGCTCATGC TCGACGCCGC CGCCCCGCTG ATCATCGGCA AGGTGTTCGG CCGCGGCTAC GAGGCGTCCG TCGACATCTT CCGCTGGGCC GTCTGGCTGT CCGTGCCGGC CGGCATCGAG GCGATAGGCA ATCTTATCGT TCTCAAATAT CAAGCAAAAT TCGTGTTGCT GACGAAATGG CTGCTCGCGC TGGCCATCGC CGCACTCGTC AACCTGTTCG CGATCCCGCG GCTCGGCCTG TACGGCGCGC TCGTCGGGCT GGCGGCCGGC TATCTGGCTG CTGCCGCCGT CAACTTTTAT TACATCCGTT TCAAGCTGCG AACATGA
|
Protein sequence | MLKRFGNPDV AKAVANLVWL GLERLTQIGV AIAISGLLAR YFGPDVFGKW QYANTLLLVL APLTWVCGAE ILVPTIVQRP PAQLGAVLGS AFVLRIAVSV AALAATWVAI AAGAFDPLVG AMLAGLAVTM VFREPFVGVI NAWLQSMTYS KPQLVTSMLT ALAKALLVWL LVRAAAGPAR FAWLWALEAA AIGLALLLYY RHRNGGALGW TFDKPLFRHF ATAGTVFWLG LICMYLFLKL DRLMLERHVS FADLGRYSAA QQLNENWITL ALMLAQTIAP AFVYRVQDVA RLRRNIVRLI AMTAGLMTAG ALMLDAAAPL IIGKVFGRGY EASVDIFRWA VWLSVPAGIE AIGNLIVLKY QAKFVLLTKW LLALAIAALV NLFAIPRLGL YGALVGLAAG YLAAAAVNFY YIRFKLRT
|
| |