Gene Bcenmc03_0746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0746 
Symbol 
ID6122427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp830758 
End bp831558 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content54% 
IMG OID641637309 
ProductABC-2 type transporter 
Protein accessionYP_001764046 
Protein GI170732099 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCTC CTCAGCCATA TCCTTCGCTG CTTACCTCGC TCAAAATCCA GATGCGAGTA 
GTGTTCGCGC TAACCATGCG TGAAATCATT ACGCGCTACG GTCGTCACAA TATTGGTTTC
GCATGGTTGT TTGCAGAACC AATGTTGTTC ACGGTCGGTA TCGCGGCACT TTGGAACCTG
CTACACGAAA CGGGACAGGG ACACGAGATT AACGTGACGG CCTTTGCGGT CACAAGCTAC
TCCACGGTTC TGGTCTGGCG CAACACAATT GGCCGATGCA CGCTGGCTGT CGAGCCTAAT
GCAGCCTTGC TGTTCCATCG CAATGTTCGC GTTATCGACC TATTTTTTGC ACGCATCACA
CTTGAGATTG TCGGTACAAC GCTATCGATG CTGGTGCTGA CCAGCACACT GATCGCGATA
GGAATAATCG ACCCGCCCGC CGATGTCTTG AACATGGCAG CCGGCTGGGT GTTGTTATGC
TGGTATTCGG CCGCGCTTGG CCTGCTGATC GGGGGACTGT GCGAATACAG CGAACTTGTC
GAAAGACTCT GGCACCCGAT TTCCTACTTC CAGCTTCCTG TATCCGGCGC CTTCGTTATG
GCGAGTTGGC TCCCCCCCAA CCTGCGTGAC ATCGCAATGT TGTTTCCTGC GCCAAACTGC
GTGGAATTAT TTCGCTACGG ATACTTCGGC TCGCAGATTA CGCCATACTA CGACGTTCCC
TATACGATCA TGGTCTGTGC TTTCCTCACG TGGATCGGAC TTGCGGTTGT GAGAGACGTG
TCGACGAGAG TGGAACACTG A
 
Protein sequence
MSSPQPYPSL LTSLKIQMRV VFALTMREII TRYGRHNIGF AWLFAEPMLF TVGIAALWNL 
LHETGQGHEI NVTAFAVTSY STVLVWRNTI GRCTLAVEPN AALLFHRNVR VIDLFFARIT
LEIVGTTLSM LVLTSTLIAI GIIDPPADVL NMAAGWVLLC WYSAALGLLI GGLCEYSELV
ERLWHPISYF QLPVSGAFVM ASWLPPNLRD IAMLFPAPNC VELFRYGYFG SQITPYYDVP
YTIMVCAFLT WIGLAVVRDV STRVEH