| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0548 |
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| Symbol | |
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| ID | 6122229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 603384 |
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| End bp | 604658 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641637110 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001763848 |
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| Protein GI | 170731901 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000248612 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0592698 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTTCC CTTCCCCCGG GGCGCCGCTG CACACGCAGT CGCCGCCCGC GCATTCCGAC
GCGCCAGCCG CCGCACCCCA TGCCCTCGAT GCGGCGCAGC TCGACGATGC CCCCGCCGTA
CGCCTGCTGA CGGACACGCT GCATGCGGCG CGGGTGCGCG ACGCGTCGGA CATCCACGTC
GAGCCGTTCG AGGCGGGCTG GCGCATCCGT CTGCGCATCG ACGGCGTGCT GCATGAACAT
GCGCGACCGC CGCTGCACCT GCGCGATGCG CTCGTCACGC GGATCAAGAT GCTCTCGCGC
ATGGACATCG CCGAGCGGCG GCTTCCGCAG GACGGCCGGC TGCGCATTGC GATCGACGGA
GGCACGCGCG GCGACTACCG CGTCAGTTCG CTGCCCACGC TGTTCGGCGA AAAGCTCGTG
CTGCGGCGGC TCGAAACGCT GCCGCCCGAT CTCACGCTTG CCAACCTCGG CTTCGACGCG
CGGCAGGCCG CCGCGATGGA GGCCGCGATC CGTGCGCCGC ATGGCCTCGT GCTCGTCACG
GGCCCGACCG GCAGCGGCAA GACGCTGTCG CTCTACTGCG CGCTGCAGAT GCTCGATCGC
GACGCGCACA ACGTGTGCAC GGTGGAAGAT CCCGCCGAAA TCCAGCTCGA CGGGATCAAC
CAGGTGGGCG TTGCCGACAA GGCGGGGCTC ACGTTCGCGA CGGCGCTGCG CGCGCTGCTG
CGGCAGGACC CGGACGTCAT CATGGTCGGC GAGATTCGCG ATGCGGAGAC GGCCGACGTC
GCGATCAAGG CCGCGCAGAC CGGTCATCTC GTGCTGTCGA CGCTGCACAC GAACGACGCG
CCGGCCGCCG TCGCGCGACT GCTCGACATC GGCGTCGCGC CATACAACCT CGCGGCCGCA
CTGCACCTCG TCACTGCGCA GCGCCTCGTC CGGCGCCTGT GCGTCGCGTG CCGCGTGCAT
TCGGACGCAT CGGCGCACGC GCTGCGGGAA GCCGGCTGCG ACCCGGCAGC GCTGGCAGCC
GGATGGCGGC CGTTCGTCGC GCGCGGCTGT TCCGCCTGTC ACGGCATCGG CTATCGCGGC
CGCATCGGCC TGCATCAGAC GATGCCGGTA TCGCCGGGGC TGGCCGAGCG CATCGTCGCG
CGGGCGAGCG TCGGCGAGCT CGCGCAATGC GTGGCGGCCG AGGGCGTGCG CACGCTGCGC
GACGCGGCAT TCGCGCGCGT CCTGGACGGC ACGACGAGCA TCGCGGAAGC CGTCGCCGCC
ACACCTGCGG CATGA
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| Protein sequence | MHFPSPGAPL HTQSPPAHSD APAAAPHALD AAQLDDAPAV RLLTDTLHAA RVRDASDIHV
EPFEAGWRIR LRIDGVLHEH ARPPLHLRDA LVTRIKMLSR MDIAERRLPQ DGRLRIAIDG
GTRGDYRVSS LPTLFGEKLV LRRLETLPPD LTLANLGFDA RQAAAMEAAI RAPHGLVLVT
GPTGSGKTLS LYCALQMLDR DAHNVCTVED PAEIQLDGIN QVGVADKAGL TFATALRALL
RQDPDVIMVG EIRDAETADV AIKAAQTGHL VLSTLHTNDA PAAVARLLDI GVAPYNLAAA
LHLVTAQRLV RRLCVACRVH SDASAHALRE AGCDPAALAA GWRPFVARGC SACHGIGYRG
RIGLHQTMPV SPGLAERIVA RASVGELAQC VAAEGVRTLR DAAFARVLDG TTSIAEAVAA
TPAA
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