Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4926 |
Symbol | |
ID | 6119307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 5927344 |
End bp | 5928099 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641636511 |
Product | hypothetical protein |
Protein accession | YP_001763270 |
Protein GI | 170729244 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000829023 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTGAAA CTAGCAAATT AAAACCAACA ACAAACACAG CTGCAAACCC AACATCTAAC TATAGAAAGA TGACTAAGGC CTTCATCATA GGCCTACCTC GATCTGGTAC AACAAGCGTT AGCGTGGCAC TGCTTGAGCA TGGTTTTAAA GTGGCACATC AGGGATTCAC TAAGCAGACC TTTGAGTTAG CAGATATCGT GTCTGACGCT CCCTGTTTCA GTGATTACAA GCAGTTAGCT AGGTTATATC CACAAGCTAA GTTTATCTAT CTCGATAGGG AGCTTGAGGC TTGGGTGCCA TCGATGCAGA TGCTACTAAG CCGTATGTTG CCTCATCTGG ACCGCAAAAC TGGGCGTTTT CATCCCATTT TAAAGCGTAG TTTTAGCCAC AGTTTTGGTG TCGGCGAGGT GAGTGACCCT ATGGATGGAC AACATTTAGT TGAGTGTTAT CAGCGTCATA AGAAAGCCGT ATTTGAGTTT TTCTGCTCAG TAGAACAGCA TCAAGATAAC TTTATGAGTA TAAATATCAG CGAAGAGGGA AGTCTATCTA AGTTACTCAA TTTCTTAAGC TTTGAGAGTG AACAAAACGC TTCTGAGATG AACTTTCCTC ACTTAAACTT CCCACATTTA AACTTTCCAC ACTTAAATAA GGGCCGAAAC GTGGCCAGCT GGGATGAGTA TAAACATGGG AATAAGATCA GCAGTAATGC TGCAGGCCCT GAGAATCGTA AGTTTTTCGA CTATAAATTA ATTTGA
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Protein sequence | MTETSKLKPT TNTAANPTSN YRKMTKAFII GLPRSGTTSV SVALLEHGFK VAHQGFTKQT FELADIVSDA PCFSDYKQLA RLYPQAKFIY LDRELEAWVP SMQMLLSRML PHLDRKTGRF HPILKRSFSH SFGVGEVSDP MDGQHLVECY QRHKKAVFEF FCSVEQHQDN FMSINISEEG SLSKLLNFLS FESEQNASEM NFPHLNFPHL NFPHLNKGRN VASWDEYKHG NKISSNAAGP ENRKFFDYKL I
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