Gene Swoo_4926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4926 
Symbol 
ID6119307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5927344 
End bp5928099 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content42% 
IMG OID641636511 
Producthypothetical protein 
Protein accessionYP_001763270 
Protein GI170729244 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000829023 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGAAA CTAGCAAATT AAAACCAACA ACAAACACAG CTGCAAACCC AACATCTAAC 
TATAGAAAGA TGACTAAGGC CTTCATCATA GGCCTACCTC GATCTGGTAC AACAAGCGTT
AGCGTGGCAC TGCTTGAGCA TGGTTTTAAA GTGGCACATC AGGGATTCAC TAAGCAGACC
TTTGAGTTAG CAGATATCGT GTCTGACGCT CCCTGTTTCA GTGATTACAA GCAGTTAGCT
AGGTTATATC CACAAGCTAA GTTTATCTAT CTCGATAGGG AGCTTGAGGC TTGGGTGCCA
TCGATGCAGA TGCTACTAAG CCGTATGTTG CCTCATCTGG ACCGCAAAAC TGGGCGTTTT
CATCCCATTT TAAAGCGTAG TTTTAGCCAC AGTTTTGGTG TCGGCGAGGT GAGTGACCCT
ATGGATGGAC AACATTTAGT TGAGTGTTAT CAGCGTCATA AGAAAGCCGT ATTTGAGTTT
TTCTGCTCAG TAGAACAGCA TCAAGATAAC TTTATGAGTA TAAATATCAG CGAAGAGGGA
AGTCTATCTA AGTTACTCAA TTTCTTAAGC TTTGAGAGTG AACAAAACGC TTCTGAGATG
AACTTTCCTC ACTTAAACTT CCCACATTTA AACTTTCCAC ACTTAAATAA GGGCCGAAAC
GTGGCCAGCT GGGATGAGTA TAAACATGGG AATAAGATCA GCAGTAATGC TGCAGGCCCT
GAGAATCGTA AGTTTTTCGA CTATAAATTA ATTTGA
 
Protein sequence
MTETSKLKPT TNTAANPTSN YRKMTKAFII GLPRSGTTSV SVALLEHGFK VAHQGFTKQT 
FELADIVSDA PCFSDYKQLA RLYPQAKFIY LDRELEAWVP SMQMLLSRML PHLDRKTGRF
HPILKRSFSH SFGVGEVSDP MDGQHLVECY QRHKKAVFEF FCSVEQHQDN FMSINISEEG
SLSKLLNFLS FESEQNASEM NFPHLNFPHL NFPHLNKGRN VASWDEYKHG NKISSNAAGP
ENRKFFDYKL I