| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4913 |
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| Symbol | |
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| ID | 6119294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5907568 |
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| End bp | 5908932 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641636498 |
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| Product | amino acid carrier protein |
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| Protein accession | YP_001763257 |
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| Protein GI | 170729231 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.176306 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGTTAG CATCCATCTC TGCTGAATTT GCCGATCTTG CTTGGGGACC ACATATGTTG
GTGCTCTTAG TGGGGGGCGG GCTCTTCTTT ATTCTCTACT CTCGCTTTAT CCCTTTTAGA
TATCTGGGTC ATGCAGTGGC TATTGTTCGA GGCAAACACC CTGATAAGGG GGCTGTTGGC
CATATCAGCC ACGCCGGTGC ACTCTCCAGT GCTATGGCTG GTACTGTGGG AATGGGCAAT
ATTGGTAGTG TGGCAGTGGC GATCGTGGTG GGTGGCCCAG GGGCTATTTT CTGGATGTGG
ATCAGCGCCA TTGTTGGTAT GGCGACCAAG TTTTTTACCT GTACTCTCGC CATTATGTAT
CGAGGCAAAG ATGAAAACGG CCAAGTGCAG GGCGGCCCCA TGTACATTAT TACTCAGGGG
CTAGGGAAAA AGTGGCACTT CTTAGCGGTC TTTTTCTGTG TGGTTGGTTT AGTGGGTAAT
TTCCCTCTGT TTAATACCAA TCAGCTGGTT CAAATTCTCA AAGAGTGGCT GATCATCAAG
CCAGGTTTCT ATGGTGAAGA TCAACCCACT TTTTGGTTAG ATCTCTCCAT GGGAATTGTT
GTTATGTTTC TCGTGGCAAG CGTGATCTTA GGGGGAATAA AGCGGATAGC CAGCGTGGCA
TCCAGTGTTG TGCCAACCAT GATACTGCTT TATATGAGCT GCGCTTTTTA TGTTATCGCT
ACCCATATTG AGGAGATCCC CGGATATTTT AGTCTAATTG TAGAGCAAGC TTTCTCACTC
AACTCAGTGG GCGGCGGCAT ACTGGGCACC ATGTTGATCG GCATCCGCCG CGCTGCGTTC
TCTAATGAAG CGGGAATAGG TACAGAAGTG ATGGCACATG GCAGTGCGAA AACCAGTGAG
CCCGTGAAAG AGGGCTTAGT TGCCATGTTG GGCCCAGCTA TCGATACCTT GCTGGTCTGC
AGCGCCACTG CGATGATCAT ATTGATTTCT GGCGTATGGC AGACCACTGA TGTATCCGGC
GTTAGTTTAT CTGCCAGAGC CTTTGAGTCG ACTATGCCGG GAGTGGGACC TTACTTACTG
ATAGTCTGTG TGTTCTTTTT TAGTATCAGT ACCATCTTTA CCCAAGCCTT TTACGGCGGC
CAATGTTTTA GTTTTCTGTT TGGGGCCAAG CGAGTGAAGT ATTACCAATA CTTCTTCCTG
CTGGCTATCT TGTTTGCCGC GACAGCGACC TTAGATGAGA TAGTTAATAT TATCGATGGT
GCTTACGCCT TAATGGCGAT ACCCACTATG GTCTCAGCGC TATTGCTGGC ACCTAAGGTG
AAAGCGGCTG CAGATGATTA CTTTGCTCGA TTAAACAAAA GGTAA
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| Protein sequence | MTLASISAEF ADLAWGPHML VLLVGGGLFF ILYSRFIPFR YLGHAVAIVR GKHPDKGAVG
HISHAGALSS AMAGTVGMGN IGSVAVAIVV GGPGAIFWMW ISAIVGMATK FFTCTLAIMY
RGKDENGQVQ GGPMYIITQG LGKKWHFLAV FFCVVGLVGN FPLFNTNQLV QILKEWLIIK
PGFYGEDQPT FWLDLSMGIV VMFLVASVIL GGIKRIASVA SSVVPTMILL YMSCAFYVIA
THIEEIPGYF SLIVEQAFSL NSVGGGILGT MLIGIRRAAF SNEAGIGTEV MAHGSAKTSE
PVKEGLVAML GPAIDTLLVC SATAMIILIS GVWQTTDVSG VSLSARAFES TMPGVGPYLL
IVCVFFFSIS TIFTQAFYGG QCFSFLFGAK RVKYYQYFFL LAILFAATAT LDEIVNIIDG
AYALMAIPTM VSALLLAPKV KAAADDYFAR LNKR
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