| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4892 |
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| Symbol | |
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| ID | 6119273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5884358 |
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| End bp | 5886187 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641636477 |
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| Product | glucosamine--fructose-6-phosphate aminotransferase |
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| Protein accession | YP_001763236 |
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| Protein GI | 170729210 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
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| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.664271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGGAA TCGTAGGCGC TGTGGCGCAA AGGGATGTTG CTGAAATTTT GGTTGAGGGA
CTTAGACGTC TTGAATATCG TGGATATGAT TCAGCTGGTG TCGCCGTTAT TAATGATGGA
GAGCTAAGAA CGACTCGTCG TGTTGGTAAG GTGCAGGAGC TATCGGCTGC ACTTGATGAT
TCTCCATTAG TAGGCGGTAC AGGTATCGCT CATACGCGCT GGGCTACTCA TGGCGAGCCA
AGTGAGCGTA ATGCTCATCC TCATCTCTCT AGCGGTGATA TTGCTGTTGT TCACAACGGT
ATTATTGAAA ACCACAACAA GCTACGTGAG ATGCTTAAAG GCTTAGGTTA TGTCTTCACA
TCAGATACAG ATACCGAAGT TATCTGCCAT CTAGTACACC ATGAGTTAAA GAGCCACGAC
ACACTACTAG CTGCAGTACA AGCAACGGTG AAACAGCTTG AAGGTGCTTA CGGTACTGTG
GTTATCGACC GTACAGACAG TGACCGTATG ATTGTTGCCC GTAGCGGTAG TCCATTGGTT
ATCGGTTTTG GTCTTGGGGA GAACTTTGTT GCTTCCGATC AGTTAGCTTT ACTTCCAGTT
ACACGCTCTT TTGCTTTCTT AGAGGAGGGG GATGTTGCTG AGGTGACACG TCGTACGGTT
AGCATTTTTG ATATTGATGG TAATGCTGTT GAGCGTGAAG TAAAAGAGTC TGAAGTGACC
CATGATGCTG GTGATAAAGG GGAGTACCGT CATTACATGC TAAAAGAGAT CTACGAGCAG
CCACGTGCTA TAGCCCATAC TTTAGAGGGG CGTATTGCTA GCGGGACTGT GTTGGACTCA
GCATTTGGTG AGAACGCTGC TGAGTTTCTA AAAGATATTA AACACGTACA AATTATTGCT
TGTGGTACCA GCTACCATGC GGGAATGGCT GCACGTTACT GGCTAGAGGA TTGGGCTGGT
GTTTCCTGTA ACGTAGAGAT CGCATCTGAG TTCCGTTACC GCAAATCTCA TATGTTCCCT
AACAGCTTGT TAGTCACTAT CTCTCAGTCT GGTGAAACGG CGGATACTTT AGCTGCACTG
CGTTTGGCAA AAGAGATGGG CTACAAAGCC ACTATGACCA TCTGTAACTC ACCGGGTTCA
TCTCTGGTAC GTGAATCAGA TATGGCGTAT ATGATGAAAG CTGGCGCCGA GATAGGTGTT
GCGTCTACTA AAGCGTTCAC GGTTCAGCTT GCTGGTCTGT TGATGCTAAC AGCGGTTGTG
GGTCGCCATA ATGGTATGTC AGATGAGATG CAGGCTAAAA TTACTCAAAG CTTACAATCT
ATGCCAGCTA AAGTTGAGCA AGCACTTGGA TTAGATGATG CTATTGCTGA ACTTGCCGAA
GATTTTGCTG ACAAGCATCA CGCACTGTTT TTAGGTCGTG GCGACCAATA TCCAATCGCG
ATGGAAGGGG CACTTAAGCT TAAAGAGATC TCCTACATTC ACGCCGAAGC TTATGCATCT
GGCGAGCTAA AGCATGGTCC ACTGGCTTTG ATCGATGCCG ATATGCCTGT GATTGTGGTT
GCGCCAAACA ACGAGCTGCT TGAAAAGTTA AAATCGAATG TTGAAGAGGT ACGTGCTCGT
GGTGGCTTGA TGTACGTATT TGCCGATGTG GATGCTGAGT TTGAGTCTGA TGACACCATG
AAAGTGATTC AAGTGCCTCA TTGTGATGAG TTTATGGCAG CGCTTATCTA CACCATACCT
TTGCAATTAC TCTCTTACCA TGTTGCCTTA ATTAAAGGTA CTGATGTGGA TCAACCACGT
AACTTAGCTA AATCGGTAAC GGTAGAGTAA
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| Protein sequence | MCGIVGAVAQ RDVAEILVEG LRRLEYRGYD SAGVAVINDG ELRTTRRVGK VQELSAALDD
SPLVGGTGIA HTRWATHGEP SERNAHPHLS SGDIAVVHNG IIENHNKLRE MLKGLGYVFT
SDTDTEVICH LVHHELKSHD TLLAAVQATV KQLEGAYGTV VIDRTDSDRM IVARSGSPLV
IGFGLGENFV ASDQLALLPV TRSFAFLEEG DVAEVTRRTV SIFDIDGNAV EREVKESEVT
HDAGDKGEYR HYMLKEIYEQ PRAIAHTLEG RIASGTVLDS AFGENAAEFL KDIKHVQIIA
CGTSYHAGMA ARYWLEDWAG VSCNVEIASE FRYRKSHMFP NSLLVTISQS GETADTLAAL
RLAKEMGYKA TMTICNSPGS SLVRESDMAY MMKAGAEIGV ASTKAFTVQL AGLLMLTAVV
GRHNGMSDEM QAKITQSLQS MPAKVEQALG LDDAIAELAE DFADKHHALF LGRGDQYPIA
MEGALKLKEI SYIHAEAYAS GELKHGPLAL IDADMPVIVV APNNELLEKL KSNVEEVRAR
GGLMYVFADV DAEFESDDTM KVIQVPHCDE FMAALIYTIP LQLLSYHVAL IKGTDVDQPR
NLAKSVTVE
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