| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4889 |
|---|
| Symbol | |
|---|
| ID | 6119270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 5879820 |
|---|
| End bp | 5881097 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641636474 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001763233 |
|---|
| Protein GI | 170729207 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3681] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCAG TGTGGCAAAA GTATATTGAG ATCATTAACC AAGTTGTTAA ACCTGCGCTT
GGCTGTACCG AACCTATTGC AGCCGCCTAT GGTGCAGCGG TTGCTGTTCA GGAGTTAGGT
TGTTCCGTGC CTGACTCATT AGAGGTTTTT GTTTCGGATA ACCTTTATAA AAACTCAATG
GGAGTATTTG TTCCTGGAAC AGGAAAGATA GGTCTTGCAA TTGCAGCTGC CTCGGGAGCG
ATTGGCGGCA ATGCTGATGC TGGCCTTGAA GTATTAGCAG CGATAACACC TGAGCAGGTT
TTACAGGCTC AGGAGATGAT AGATGCTGGC AAAGTGTCTG TTAAGCGTAC CGTTACCGAT
GAATTTATCT ATTGCTGCGT TATCGCAAAG TTTGAGGGCA GAGAGTCGCT GGTTAAAATT
TGCGGCGGTC ACACCTTAAT TGTTGAGAAG CAACTGAACG GAAAAATTAA TTTTATAGCC
GATGAATCAA GTGCAACCTC TACAGGCTCT ATCTGTGAAG GGGTCGATAT TAATATCGCC
TCTATCTATG AGTTTGCCAC TCAAGTAGAG CTGGAGAAGA TAGCATTTAT CCTTCAGGCC
GCGGATCTCA ATACCAAGTT GTCAGATGAG GGGATGACAA ACTCCTACGG ACTTGAAGTC
GGTCGTACAA TGAAGAAGAG TATCGATGAA GGGATTTTAT CTAACGATCT GCTGAATAAA
ATTGTGATGG AAACCGCTGC TGCATCAGAT GCGCGTATGG GCGGAGCAAC ACTTCCTGCG
ATGAGTAATC TTGGCAGTGG TAATCAAGGT ATTGCTGCGA CGATCCCTGT CGTTATCGCT
GCAAAGCATT ATAAAAACAG TGATGAACAA TTGGCGAGAG CGTTAATTTT AAGTCACCTT
GGCGCTATCT ATATTAAGTC TCATTATCCT CCTCTATCGG CTTTCTGTGG CAATACAGTG
ACCAGTGCTG CGGCTGCGAT GGCCATGGTA TACTTGGCTG GTGGAAGTTT TGAGCAGTCC
TGTTTTGCTA TCCAAAATGT TATCAGTGAT AGCTCAGGTA TGGTTTGCGA CGGTGCTAAA
GCTTCCTGTG CAATGAAGGT TAGTACTTCA TCTTGCGCCG CTGTAAGAGC CTTCTTAATG
GCGATGAACT CCCGCTCTGT TTCTGGGCAG GGGATTATTG CTAAGGATGT TGAACAAACG
ATTATCAACA TTGGCCAGAT GATCAGTCAT GGTATGCCAT CAACGGACAC CACTATCATC
AATATCATGT CTGCATAG
|
|---|
| Protein sequence | MKPVWQKYIE IINQVVKPAL GCTEPIAAAY GAAVAVQELG CSVPDSLEVF VSDNLYKNSM
GVFVPGTGKI GLAIAAASGA IGGNADAGLE VLAAITPEQV LQAQEMIDAG KVSVKRTVTD
EFIYCCVIAK FEGRESLVKI CGGHTLIVEK QLNGKINFIA DESSATSTGS ICEGVDINIA
SIYEFATQVE LEKIAFILQA ADLNTKLSDE GMTNSYGLEV GRTMKKSIDE GILSNDLLNK
IVMETAAASD ARMGGATLPA MSNLGSGNQG IAATIPVVIA AKHYKNSDEQ LARALILSHL
GAIYIKSHYP PLSAFCGNTV TSAAAAMAMV YLAGGSFEQS CFAIQNVISD SSGMVCDGAK
ASCAMKVSTS SCAAVRAFLM AMNSRSVSGQ GIIAKDVEQT IINIGQMISH GMPSTDTTII
NIMSA
|
|---|
| |