| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4807 |
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| Symbol | |
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| ID | 6119184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5791851 |
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| End bp | 5792825 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641636388 |
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| Product | formate dehydrogenase, gamma subunit |
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| Protein accession | YP_001763151 |
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| Protein GI | 170729125 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2864] Cytochrome b subunit of formate dehydrogenase |
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| TIGRFAM ID | [TIGR01583] formate dehydrogenase, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.137457 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAATT GGTTCAAACA GATTGGCTTG ATCTTAGTGC TAATGTTCAG TGCTATCGGC
CTAGCTCAAG CTGGAGCAGA GCAGCCTGTT GCTACTGATG GTCAGATCTG GTCTCAGTTA
CAAGCGGGCG CCACAGGTGA GACTACCTCT CACGGTGAGT TCCACAACCA GCCGATCAAT
ACCTATGATC TTCGTGTTCT AGAGCTACGT AGCGACCTAT TAGCGCCAGC GTTAATGGCT
GCGCTATTTG GCATGATCAT CATCTTTGTG GTTTTCATAA AGATTAACGG TATCTCTAAG
CTACATGGTG GCTACTCAGG TAAGTTGGTC TACCGCTGGT CTAAGTTTGA TGTCTCAATC
CATTGGTTAG GTGCGATCCC ATGTCTGCTG TTGATCTTGA CTGGTCTGAC TCTGTTGGCA
GGGCGTTTCT TCTTCCAGCC ATACATAGGT GAAGGTCTAT GGGCAGGCTT AGTCTACGGT
GCCAAACAGG TGCATGACTT CATGGCGATT CCGTTCATGT TAGGTTGGGC ATTGATGGTC
ACCTTATGGG CTAAGAATCA GCTACCTAAG ATGTATGACC TTAAGTGGAT GATGGTGGTT
GGTGGTTACA TCAACTTCGG TCCATTCAAA GGTAAACACC CTGATGCTGG TTTTGCTAAC
GCCGGTGAGA AGTTATGGTT CTGGGCATTT GCCCTATTTG GTCTAGTGAT CTCTGCCTCT
GGTATGTTGT TGCTATTCCC GAACTTGTTC GAGCCTAGCC GTACATTAAG CTTAATTGCA
TTAGTGCTTC ACTCTGTTGC TGCTATCATC ATTACTGCTT TCTCAATCGT ACATATCTTT
ATGGCAACGG TTATGTCTGA AGGTGGTATG GAGTGTATGG TGTCTGGCTA CTGTGACGAA
ACTTGGGCAA GTCAGCACCA CAACCTTTGG TTCGATGAGA TCAAAGAAAA TGGTACGCTT
AAATACAAAG ACTAG
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| Protein sequence | MNNWFKQIGL ILVLMFSAIG LAQAGAEQPV ATDGQIWSQL QAGATGETTS HGEFHNQPIN
TYDLRVLELR SDLLAPALMA ALFGMIIIFV VFIKINGISK LHGGYSGKLV YRWSKFDVSI
HWLGAIPCLL LILTGLTLLA GRFFFQPYIG EGLWAGLVYG AKQVHDFMAI PFMLGWALMV
TLWAKNQLPK MYDLKWMMVV GGYINFGPFK GKHPDAGFAN AGEKLWFWAF ALFGLVISAS
GMLLLFPNLF EPSRTLSLIA LVLHSVAAII ITAFSIVHIF MATVMSEGGM ECMVSGYCDE
TWASQHHNLW FDEIKENGTL KYKD
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