| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4786 |
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| Symbol | |
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| ID | 6119163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5773540 |
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| End bp | 5774646 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641636367 |
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| Product | ABC transporter related |
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| Protein accession | YP_001763130 |
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| Protein GI | 170729104 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00107272 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000252906 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTCAAG ACGTCGGTGA TCTCTATTGT CAGATCAAAC AAGATAAACA GATCCGTCTA
GATGCCGAGT TTGTCTGTAA GGCGGGTGAA GTACTGGCTG TGGTTGGCCC TTCCGGTGGC
GGTAAATCAA CGCTACTGCG TATGATTGCC GGTTTGAATC ATCCAGAATC TGGTGTGATC
CGCTATGGTG ACAGGGATTG GTTTAACGAT GGAGATAAAA TTCATCTTAC GCCTCAGCAG
CGTCACCTAG GCTATGTGCC ACAACATTTC GGTCTATTTC CCAATCTGAC CGCCTTAGGT
AATGTTGTTG CTGCACTTGA TCATATTCCG AAAGCTGAGC GTGAGCCCAG AGCGAAAGAG
TGGCTAGAGC GAGTTAATCT TCATGGTTTG CCCGACCGCT TGCCCGCTAA TCTTTCAGGT
GGCCAGAGAC AGAGGGTGGC TCTGGCTAGA GCTCTAGCTC GTGAACCCTC AGTCTTGCTA
CTTGATGAGC CATTTTCTGC GGTGGATAGG GAGACCCGTG AGCGTCTCTA TCTAGAGCTT
GCTCGCCTTA AATCTCAGCT CTCTATTCCT GTGATCATGG TGACTCACGA TCTCAATGAA
GCACTACTGC TCGCCGATAA TATGATCTTA ATTAGCCAAG GTAAGATGCT TCAGCAGGGG
ATCCCCCATG AAGTGCTGAC TAGGCCGCGC ACCGAAGCTG TGGCGAAACA GATGGGTCTG
AGAAATATCT TCGATGCTTA CGTTATCGCC CAAGAGGAGG AGCGTCAGAT CACTTGGTTG
AAGTTTGGTG AGCATCTGAT AGCTAGTACT TATTTTGATA GCTTAGAGGT CGGCGCCAAA
GTGCGTTGGG TTATCCCTAA TCAGGGGATA CGTTTTAACT CTATTAAGCA GGGGCGTCTT
TGTCGCAGCT TTAATAAGCT AGAGATCACT ATAGATTCCA TGTTAACCAT GGGAGAGACA
GTTCGCTTGA TTGCCAGTGT TAAAGGGGTT AAACATCAGT TACATGCTGA GGTTCCTCTG
CATTACTCTA ATAAAATTGG CTTAGTGGTT GGTGTGGTGA CAGAGGTCGC GTTTAAGTCT
GAGCTGATCC ATATTTTAGA ACCTTAA
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| Protein sequence | MPQDVGDLYC QIKQDKQIRL DAEFVCKAGE VLAVVGPSGG GKSTLLRMIA GLNHPESGVI
RYGDRDWFND GDKIHLTPQQ RHLGYVPQHF GLFPNLTALG NVVAALDHIP KAEREPRAKE
WLERVNLHGL PDRLPANLSG GQRQRVALAR ALAREPSVLL LDEPFSAVDR ETRERLYLEL
ARLKSQLSIP VIMVTHDLNE ALLLADNMIL ISQGKMLQQG IPHEVLTRPR TEAVAKQMGL
RNIFDAYVIA QEEERQITWL KFGEHLIAST YFDSLEVGAK VRWVIPNQGI RFNSIKQGRL
CRSFNKLEIT IDSMLTMGET VRLIASVKGV KHQLHAEVPL HYSNKIGLVV GVVTEVAFKS
ELIHILEP
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