| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4613 |
|---|
| Symbol | |
|---|
| ID | 6118979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 5585355 |
|---|
| End bp | 5586713 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641636184 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001762958 |
|---|
| Protein GI | 170728932 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGTC TGTTTTCAAG TTTCGTTCTT ACCGGTTTAC TCACCCTTGT AGGGTGTAGT
AGTGACGACA ATAATACTGT GCCGGCTCCG GTTGATGTGT CACAAATTCG TGTAATTCAT
GCGAGTGCCG ATGCGCCAAT GGTAAACATA ACCGCCAACA ATCAGACACT ACTTTCTGAT
GTCGATTATG CTATCTCTTC AGGTCTACTT AGCATCAACT CCGATAACTA TGAAATCACA
GTTGATGCTC AATTGCCTAA TGGAGAAACA ACAACAGTAT TAACCACAGA TCTAGTGGCA
GAAAAAGATA TCGAATATAC CGCAGTGGCC ATTGGAAATG TCGCAGGGGA ATCACTAGAT
TTAGCATTAA TTGCCAATGC TACGAGTGAC ATTGCTACTG GATACACCCG CGTTCAAGTA
CTCCACGGTG CTGTAGCCGT TGGCATGGTT GATATCTATG TAACCGAAGT CAATGCCGAT
ATCAGCAATA TGGCTCCTAC ACTATCAGTT GATTACATGG CAAACACTGA TCAGTTGGAG
ATACTCGCTG GCAAGTACCA AATTCGAATT ACTGCCGAGG GCCAAAAAGA AGTTGTTTAC
AACTCAGGAG ATGTAACTCT AGAGGCTGAA ACCGATTACT TACTCACTGC AATAACTAAC
GTCTGGAGTG GAGACTCACC AGTAGCACTG CTTGCCGCAC TACCTGACGC ACAAGTATTA
ATACAGGACA AAGATGCTGG AACCAACCTA CGTGTCATTC ATGCCGTCGC CGATGCGCCT
GCCGTTGATG TATTCCTCGA TGGCAACACA ACACCTGCTG TAGATATGCT CTCTTTCAAA
CAAGCCACCG GATTTTTGAA TGTGCCAGAG GGGGCTCACA CTGTAACGGT CGCGGCAGAT
GCTGACAATT CAGTCGTGGT TATTAATGCC GCAGAGGTCG AATTAGAACA GGGAAGAAGT
CACTCAGTAT TTGCTGTCGG CTCCTTAACA GATTCAGACA TCTCACCGTT AGTGGTAGTC
GAAAATCCAC GTCGAATCGC CACAGCAGCA AAACTCAATG TCACCCACAC GTCATATTCT
GCAGGAAACG TTGATATCTA TTTAACTGCT ACCAATGACA TAAGTGATGC AACACCAGCG
TTAAGTGACG TGCCTTTTAA AGCAACTTCT GGTGCACTAT CGATTGCTGC AGGTGACTAC
GTAGTTAGTG TCACGCCGCA CGATAGCAAA ACTGTTGCAA TTGGTCCTCT AGCAGTCACC
TTAGAGGCAA ATGGGGTATA CAGTCTTGCA GCCGTAGATA ACACCGGAGG CGGAATACCA
CTAGGTGTAA TATTAATGGA TGACTTCGTA GATAACTAA
|
|---|
| Protein sequence | MQRLFSSFVL TGLLTLVGCS SDDNNTVPAP VDVSQIRVIH ASADAPMVNI TANNQTLLSD
VDYAISSGLL SINSDNYEIT VDAQLPNGET TTVLTTDLVA EKDIEYTAVA IGNVAGESLD
LALIANATSD IATGYTRVQV LHGAVAVGMV DIYVTEVNAD ISNMAPTLSV DYMANTDQLE
ILAGKYQIRI TAEGQKEVVY NSGDVTLEAE TDYLLTAITN VWSGDSPVAL LAALPDAQVL
IQDKDAGTNL RVIHAVADAP AVDVFLDGNT TPAVDMLSFK QATGFLNVPE GAHTVTVAAD
ADNSVVVINA AEVELEQGRS HSVFAVGSLT DSDISPLVVV ENPRRIATAA KLNVTHTSYS
AGNVDIYLTA TNDISDATPA LSDVPFKATS GALSIAAGDY VVSVTPHDSK TVAIGPLAVT
LEANGVYSLA AVDNTGGGIP LGVILMDDFV DN
|
|---|
| |