| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4605 |
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| Symbol | |
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| ID | 6118971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5577008 |
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| End bp | 5579407 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641636176 |
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| Product | Patched family protein |
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| Protein accession | YP_001762950 |
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| Protein GI | 170728924 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4258] Predicted exporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.214828 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGATA AGCTTGCCGT ACGACTGAGC CAGTGCTCAG CTAAGCTCAA ATTTTCACTT
TGGTTACTGC TGCTCTGCTT AACCTTAATC ACTGGGCTAC AGCTTTGGCA AGGTGGAGCT
AAGATCCAAA GTGATATCTT AGCTATGTTA CCTAAAATAC AGGAAGATCC CTTAACACAA
ACCGCATTAA ATAGGGTGGA TCAAGAGCTC TCCAATAGCA TCTATCTAGC GTTACTATCT
GACAGTGAGG CTCAGGCGGT TCTCGCCGCT CAAACCTTAA TATCTAACCT TAATAGCGAT
GAGAGAAACA CTTTTACCCA AGTAAGAAGT GCAGATCTTA ATCAAGCAGA AGCGCTAAAC
AGTTACTACT TCAACCATAG ATTCAACCTG CTCACCCCCA CGCAAGAGGC GCTGCTTAAT
TCGAATAAAC TGGACAGTTT AATTCTTCAA ACTCAGCAGC AGCTCTACAA TGCTTTTGGC
TATGCAAACA GTGGACTTAT CGCTAAAGAT CCTCTGTTGT TATATCCCGC CAACCTACAG
GCGATGGCAC CTAAACAAAC ACTGAAAGTC CAGCAGGGAA TTCTAATCGG CGTCCAGCAT
GCCAGTGATA TACATACTCA AGATAAAGTC GCAGCGATAG TGATGGCCAA AGGCGTTGGC
AGCGCGTTTA ACCCCAATAT TCAACAGCAA CAGATAAGCG TACTGCAACA GGCTTTCGAT
GAGATCCACC AGCAAGATGC CGATATAGAG ATACTCAAAG CGGGCGCCCT GTTTCATGCA
AGTGCTGCCA CTCAAAGTGC TAAAACAGAG ATATCCACCT TAGGAGTAGC CTCACTTATC
GGGGTTAGTT TGTTAGTCTG GTTAGCATTT CGCTCTGTGA TGCCACTGGC CATCGCCCTG
CTTACCATAA GCACAAGTCT GTTAATCGCC GTGGTTGCCA CCTTAGCTAT TTTTTCAGAG
CTTCACCTAT TAACCTTAGT GTTTGGTACT AGCCTTATTG GTATCGCCAT CGACTATAGC
TTTCACTTCT ATTGTGAGCG GCTCACGCAA CCTAAATCTA ACGCAACACA AGTGATCCAA
CATATCTTTC CAGCGATCAC CTTAGCCCTG ATAACCAGCG TGCTTGCCTA TTCAGGTATA
GGACTTGCCC CCTTCCCGGG GATGCAACAG GTGGCCGTTT TTTGCGCCGC AGGGCTTATC
GCTGCTTACT TAACTATTCT ACTGGCCTAC CCTCTTTTAG CATCGGGCAA ACTGCCAGAA
CGCTCAGCGC CTCTAGAGTT TGCTGAACAT TACCTAAATA CATTGAGCCG TTTTCAAGCC
CAATTGAAGG GTAAAAAATC CCTACTTTTA CTGATAGTGT TGATCACAAT CGGCTCTCTA
GGACTCACTA GACTGACCAC AGATGATGAC ATTCGAAATC TTCAGCAGAG TCCAGAGTCT
CTACAGCTCG AGGAGCAACA ACTAAGGGCA ATGCTCAGTG GCGGTACCGA TAATCAATTC
CTACTTGTCA GGGCTGACAG TGAAGAGTCA CTTCTCCAAT CCCTTGAGCA GCTAACACCT
AGACTTAACA AGCTAATAGA AAAAGGGGTG ATTGGTAATG CTTTTAGCCT GACAAGTTAC
CTGCCGAGTC AGCAGCAGCA AGCTCATAAC TACCAGCTAC AGGCAAAGAT CTACCACAAA
CTCGACTATG TTTTGGACAA CCTCGGGTTG GATGAAGCAC TTCGCCCTGA TCTCAAGCAG
AGCTATAACC GAGCCGCAGG AAAATATATT GATGCCAGTT CCTTTATCAA CTCAGATGCA
GGTCAGCTGT TCGCTCCGCT TTGGATAGCA GCCGATGAAC AACACGATGA GTTTGGTAGC
ATAGTCTTAC TGGGGGGGAT TACCGACCTG CCAACTTTGG TTAAACTCTT TCCCCATGGT
AGCGAGATAC AACTTATCGA TAAAGTCGGA GATATCTCTG ATATTATGGG GAAATATCGA
GAGTTAACCT TAATCTTATT AGCCATCGCC ATGACCATCG CAGCCGTGAT ATTCAGTAGC
CGATTTAGCA TTAAGCTAGC AGCTTTGGTC GTCGCAGTAC CGGCACTTTC AGCCATATTA
ACCCTATCTC TACTTGGGTT AATCGGCTCG CCTCTGACTC TTTTTCATGC CTTGGCCCTA
ATACTTGTTT TCGGCATAGG CGTCGACTAC AGCCTCTTCT TTGCGGAGTC TAAACAGCAG
AGCAGAGGCG TGATGATGGC GGTCTTTATG TCGGCATGCT CGACAATTTT AGCATTCGGC
TTGCTGGCAT TTAGCAGCAC ACCCGCCATA CACAACTTTG GACTCACACT CCTGTTAGGG
ATAGTCTTTA CCTTTGCACT CTCCCCATTT ATTCAAATTT TCACAAGGAC CATTAAGTGA
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| Protein sequence | MIDKLAVRLS QCSAKLKFSL WLLLLCLTLI TGLQLWQGGA KIQSDILAML PKIQEDPLTQ
TALNRVDQEL SNSIYLALLS DSEAQAVLAA QTLISNLNSD ERNTFTQVRS ADLNQAEALN
SYYFNHRFNL LTPTQEALLN SNKLDSLILQ TQQQLYNAFG YANSGLIAKD PLLLYPANLQ
AMAPKQTLKV QQGILIGVQH ASDIHTQDKV AAIVMAKGVG SAFNPNIQQQ QISVLQQAFD
EIHQQDADIE ILKAGALFHA SAATQSAKTE ISTLGVASLI GVSLLVWLAF RSVMPLAIAL
LTISTSLLIA VVATLAIFSE LHLLTLVFGT SLIGIAIDYS FHFYCERLTQ PKSNATQVIQ
HIFPAITLAL ITSVLAYSGI GLAPFPGMQQ VAVFCAAGLI AAYLTILLAY PLLASGKLPE
RSAPLEFAEH YLNTLSRFQA QLKGKKSLLL LIVLITIGSL GLTRLTTDDD IRNLQQSPES
LQLEEQQLRA MLSGGTDNQF LLVRADSEES LLQSLEQLTP RLNKLIEKGV IGNAFSLTSY
LPSQQQQAHN YQLQAKIYHK LDYVLDNLGL DEALRPDLKQ SYNRAAGKYI DASSFINSDA
GQLFAPLWIA ADEQHDEFGS IVLLGGITDL PTLVKLFPHG SEIQLIDKVG DISDIMGKYR
ELTLILLAIA MTIAAVIFSS RFSIKLAALV VAVPALSAIL TLSLLGLIGS PLTLFHALAL
ILVFGIGVDY SLFFAESKQQ SRGVMMAVFM SACSTILAFG LLAFSSTPAI HNFGLTLLLG
IVFTFALSPF IQIFTRTIK
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