Gene Swoo_4593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4593 
Symbol 
ID6118959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5566932 
End bp5567801 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content47% 
IMG OID641636164 
Producthypothetical protein 
Protein accessionYP_001762938 
Protein GI170728912 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000173343 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCAAGTCA ATCAAGAAGA TAGAATCGCG CCGCAGGAAA AGTCTGCAGG AGCTAATGCC 
CTCGCCATCG TGGCTATCGT TGTTGTATTA CTGCTGTCAG GTGGTGCTTA CTACTACTTT
AGCTCCCAAG AACCTGTGCA ACCTGAAATC GTTGAGGTCG TCGAACTGCC AGATCCAGTT
CCTGCTGAGC CTTTGCCAAC AGAGGCACCT ATCCCAGAAC CTGTGATAGA GGTAGAACCT
GAGCCAGTGG TGATTGAGGA GGCTCCAGTC GTCCCAGAGG TTGAACCTCT GCCAAGCTTA
TCCCAAAGCG ATGAGTTTGT GAGCATCAAA GCCGTTGAAA TGGCCGATGG TATGAAGATA
GAACCCCTTA TGGTTGAGCA AGATCTTGTT AGGCATTTTG TGGTTTTTGT GGACAACTTA
GCTCAAGGTG AGCTCGCCCG CAAAGTCAGC CCCATGAAAG CACCAAACCG AGTGTTTACT
GTTTCTGAGA TCACCAACAA GACCTATTTG AATCCAGACA GCTACCACAG ATATGATCTG
TATGCAGACT TAGTCAGTGG TCTAGATGAG GAGCAGTTGG CAAAGACCTA TCAAGAGCTA
ACTCCCCTGT TAGGAGAAGC ATTTGAAGAG CTAGGCTATG GTGATATGAG CTTTAATGAT
CGCATGGTTG AAGCCATAGA TGTCATGCTC GATGCTCCCA TCATAGATAG CCCAATAGAG
CTTGATGGCG TCAGTGTTAA CTATCAGTTT GTTGACCCAC AACTTGAAGC CCTACCCAAT
GCACAGAAAC TGCTGATCAG AATGGGTCCA GAAAACAGCA AAAAGGTGAA GGCTGCACTG
CGCAAGCTGA AAAAGCACTT AGCAAACTAA
 
Protein sequence
MQVNQEDRIA PQEKSAGANA LAIVAIVVVL LLSGGAYYYF SSQEPVQPEI VEVVELPDPV 
PAEPLPTEAP IPEPVIEVEP EPVVIEEAPV VPEVEPLPSL SQSDEFVSIK AVEMADGMKI
EPLMVEQDLV RHFVVFVDNL AQGELARKVS PMKAPNRVFT VSEITNKTYL NPDSYHRYDL
YADLVSGLDE EQLAKTYQEL TPLLGEAFEE LGYGDMSFND RMVEAIDVML DAPIIDSPIE
LDGVSVNYQF VDPQLEALPN AQKLLIRMGP ENSKKVKAAL RKLKKHLAN