| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4520 |
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| Symbol | |
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| ID | 6118876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5468357 |
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| End bp | 5469286 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641636082 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001762866 |
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| Protein GI | 170728840 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.152397 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTAA ATCGCGTGCA GATGTTTGCT CAGGTTGTTG AGCAGGGCAG TTTTACCGCA
GCGGCTAAGG TGATGGGGTT AACTAAGGCG ACGGTGAGTC GTAAGGTTGC TGAGCTTGAA
GCCGATGCCG GTGTTCAGTT GCTATTTCGT ACAACGAGAG CTCTTAAGCT TACCGATGCA
GGTAATGCTT ATTACAACCG GGTACATCGC ATATTGGCCG ATTTACAAAG TGCAGAAGAT
CAGCTCAGCT CCAATCAACA GATGGTGAAA GGAAACCTCA ATATTGTCTG CCCTATTGAG
TTGGGACAAC TATTTCTTGG TAGGGTGTTT GCTCAGTTCT TGACTCACTA CCCGGATATC
ACCATAGATG CGGAGCTCAC CAATCGGAAT GTTGATGTGG TTGCTGAGGG AGTAGATGTA
CTGTTTCAGA TCACCTCTAT GTCAGATCCC AGTCTGCAAA CTTACGAGAT GATAAATACA
GATAAGATGC TGATGGCTAG TCCCTCTTAT CTTGCTCGCA ATGGCACCCC TAAAGTGCCG
CAAGATCTTA GCAAACATAA AGCGATAAAA TTAAAATCGA CCCATATTGA TGGAAGTTGG
ACGCTGTTCG ATGGGAAAGA GTGGGTTACC CAAGAGCCTG AGGCACAGTT AACGGTGAAT
AATGTGACCT TAGCGCGTGA AGCGGCCATT GAAGGTCTAG GGATAACCAT AGTGCCAACT
CTTATTGCAC AGCAGGCATT AGATGAGAAG CTGTTACTTC CTCTTCTTGA AGATTACCCT
CTGGCGCAAA CTAAAATAAC CATGAGTACG CCTCAACGGG CTTATCTACC GCGAAAGTAT
CAGGTATTTA TTGAGTATAT TTATCGGGCG ATGAGCCGAA ATCCTGAGTA TCAGCTGCTG
GAAGTGCCGG ATTTTGTCTC ATTAAATTGA
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| Protein sequence | MDLNRVQMFA QVVEQGSFTA AAKVMGLTKA TVSRKVAELE ADAGVQLLFR TTRALKLTDA
GNAYYNRVHR ILADLQSAED QLSSNQQMVK GNLNIVCPIE LGQLFLGRVF AQFLTHYPDI
TIDAELTNRN VDVVAEGVDV LFQITSMSDP SLQTYEMINT DKMLMASPSY LARNGTPKVP
QDLSKHKAIK LKSTHIDGSW TLFDGKEWVT QEPEAQLTVN NVTLAREAAI EGLGITIVPT
LIAQQALDEK LLLPLLEDYP LAQTKITMST PQRAYLPRKY QVFIEYIYRA MSRNPEYQLL
EVPDFVSLN
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