| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4500 |
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| Symbol | |
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| ID | 6118856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5445758 |
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| End bp | 5447023 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641636062 |
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| Product | beta-lactamase |
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| Protein accession | YP_001762846 |
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| Protein GI | 170728820 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00711948 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTATTA ATACACAGCT AAAAACATTA CTGCTAAGTG CTTCATTAAG CGCGCTAGTG
TCACTACCGC CTGCACACGC AGGGCAAAAT AATCGCCAAG ATCAAGCACC GATGGCAAGT
GCCAAAGAGG CGAAAATAAA ACACTGGCGC GTACCTAATA GCGAGCTTAA ATTTACCGAC
ATTAGTGAGC TAAAAACCGC TTTTATTGAT AGCACACCTG CGGCTAAACA AGATGGGATA
GCGGTGGGGA AATTGGGCCT CGATGCCGGC AATAATGAGC AGATAGTCGC TTTGGCCAAA
GAGATTGCGG CAGGAAAACA CGGTAAGTTC GATAGTCTGT TGATTGCCCA TCGAGACAAA
TTACTTTTTG AATCCTACTT CTCTCGTGGC CGCATTGACC TCCCCCACCC ACAATCGTCA
GCAAGTAAAG TCTACATCAG CACCATAGTT GGCCGCGCGA TCCAGCTGGG TTACCTCACC
ATGGCAGATC TCGATAAGCC TTTAGTGAGT TTTCTAAAAA ACTTAGACCC CAGCAGATTC
ACCAAGGGGG CTGAAAAAAT CACCCTTCAC AAAGCCATGT TGATGCGCTC AGGCATACGG
ATTAGCGATG AACAAGCTGA GAAATTTAGG CAAAGCTCTC CCGAATTAAA AGGCCAAGGG
TTACTACAAG CGTATCTGGA AGCCAGTGCG CCGATAACCG AAGCTTCACA GTCATTTAAA
TATCAAAACG ATCCTATGTT AGTGATGCAA GTGATTGAAG CTGTGGTACC GGGCTCGGCA
AAAAAATTCA TCAAAACAGA GCTGTTAGAT AAGATGGGGA TCAGCAATTA TGGCTGGAGT
ACCCACCCAG TCTCAGGTCT ACCAGGTGAT GCCAGTATGA CCTCACGGGC AATGCTAAAA
TTTGGCAAAC TGGCCATGAA TAACGGCCTG TGGAATGGTG AGCAACTGAT CCCCGCAGCT
TATATCGCAA GGGCCACTGA TAGGCTGATT TACCCGAATG AAGCGGAGAT CTTTGGCGGC
GGTGAAGCAG TGTCTAATCA AGGTTATGGC TACTATTGGT GGGGCACTGA TTTAACCTAT
GATGGTAAAA GTTACGCCAG TGCCTCGGCC CAAGGGGGCG GCGGCATGTA CATCATGTTG
ATTGCAGAGT TAGATCTGGT GATAGTTGTC ACAGCTCATG AACGAGAGAA CACCACCCAG
CAATTAATCG CCGAGAGAAT TCTGCCTGCG TTTGTGTCAC AACCGGATAA GCTGGCAAGT
CATTAA
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| Protein sequence | MGINTQLKTL LLSASLSALV SLPPAHAGQN NRQDQAPMAS AKEAKIKHWR VPNSELKFTD
ISELKTAFID STPAAKQDGI AVGKLGLDAG NNEQIVALAK EIAAGKHGKF DSLLIAHRDK
LLFESYFSRG RIDLPHPQSS ASKVYISTIV GRAIQLGYLT MADLDKPLVS FLKNLDPSRF
TKGAEKITLH KAMLMRSGIR ISDEQAEKFR QSSPELKGQG LLQAYLEASA PITEASQSFK
YQNDPMLVMQ VIEAVVPGSA KKFIKTELLD KMGISNYGWS THPVSGLPGD ASMTSRAMLK
FGKLAMNNGL WNGEQLIPAA YIARATDRLI YPNEAEIFGG GEAVSNQGYG YYWWGTDLTY
DGKSYASASA QGGGGMYIML IAELDLVIVV TAHERENTTQ QLIAERILPA FVSQPDKLAS
H
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