| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4493 |
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| Symbol | |
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| ID | 6118849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5435641 |
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| End bp | 5436639 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641636055 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001762839 |
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| Protein GI | 170728813 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCATGT GTGGAACCCT GATGATTTTG GGTTTGTGTC TGGGCATTTT CAATTTTGGT
AGGCCTGAAG TACGGTTATA TGCCTCACTG CAGATAGTTT ACGCACTCTT TTCTGGTTAT
CTGTTTATTC TCGCAATGAA GAATCGCCAT ACTCTATGGC AAACTCACCT CTATTCATAC
TCACTGGCCT TCCTGGTGCT ACTCGGGATC TATCTTGCAA AATTAGAGAG CTTTCTGCTG
GCTTGGGCTT TCACGCTACC AATTATTTTC TATTTGCTGC TAGGACGAAA AGCAGGAAAG
TTAATCACCT TAACCATGAT GCTCAGTATC ATGGTGATTA TCTACCCTAA GCTGCCGAGC
TTTCGCCCAG TAATGACAAA CTTTGCCTTT AGCTATCTGC TTATCTGGGC CATATCACAT
ATCTATGAAT CTAATAGAGA ATCAGCCGAA TTAGCCCTGC ATAAGCTGGC ATTAACAGAT
CCTTTAACCG GAACAAACAA TCGTTTATCA CTACAAGAAA GGTTTAATCA ATCGACACAG
GTTAGTGAGC ATAAACCATT AACGCTTCTG CTATTGGATG TTGATCACTT CAAGCAAGTT
AATGATAACT TCGGTCACGT GGCCGGCGAT GACGTACTCA AATCGATCGC TAACTTATTG
ACTAAATATA CCGATGATCT TGATCTATTC AGAATTGGTG GAGAGGAGTT CTGCATCTTC
CTTCACAACA GCTCTACCCA AGAATCCCTA ACGTTGGCCC AGACGTTAAG AGCTAACGTA
GAGAGAGAAA CTTTCGTTAG CCAAGGGCTT AAAATCCAAG CAACTATTAG CATAGGGGTC
ACACTCTTCA AAGAGGATAT GCAGCTGTGC GATCTACTTC GAAGTGCAGA TGAGCAACTC
TATAGGGCTA AACTGAGCGG AAGAAACAGG GTCATGCATA ATCTCGTACC CGCTATAGAA
GAGGAGGTCA TGGCACAAAC CGCTCCTCTG GTCACATGA
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| Protein sequence | MGMCGTLMIL GLCLGIFNFG RPEVRLYASL QIVYALFSGY LFILAMKNRH TLWQTHLYSY
SLAFLVLLGI YLAKLESFLL AWAFTLPIIF YLLLGRKAGK LITLTMMLSI MVIIYPKLPS
FRPVMTNFAF SYLLIWAISH IYESNRESAE LALHKLALTD PLTGTNNRLS LQERFNQSTQ
VSEHKPLTLL LLDVDHFKQV NDNFGHVAGD DVLKSIANLL TKYTDDLDLF RIGGEEFCIF
LHNSSTQESL TLAQTLRANV ERETFVSQGL KIQATISIGV TLFKEDMQLC DLLRSADEQL
YRAKLSGRNR VMHNLVPAIE EEVMAQTAPL VT
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