| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4467 |
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| Symbol | |
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| ID | 6118823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5403618 |
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| End bp | 5404901 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641636029 |
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| Product | transcriptional regulator, CadC |
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| Protein accession | YP_001762813 |
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| Protein GI | 170728787 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTAAAAA TCACTCCTTA TTTGGAGTTC GATACTGAAG CGAATCAGTT AGTTGACCAC
GTAAGTGGTA AGCGGGTTAT TTTAACCTTC TCTGAGTCTG CGGTGCTGCA TCGCCTTCTA
CTCTCTTCAA ATCCTGTCTG CTCCAAAGAG GAGCTGCTCA GTGCTGGCTG GCCCGATCGC
GTCGTTGCTG TTACCTCGTT AACCCAATGT ATTAGTACCC TGCGTAAAAA GCTCGACCCT
TACCGTGAGG TGCAACTAAA AACCATCGCG CGCCGTGGCT ATCAGTTGCA TATTTCGACC
CAATCTCACG TAAAACTCTT GGCGGTGAAT GACGCCGAGT CCATGCGCGC CGCTTTTTTC
GATGTATCAC TGCTGGTTAA AATCTCAGGC ATTGTGATCG CCTTATTGCT ACTGGTTTTG
GCTTGGTATT TCAGTGACTA CCATAAGATA AAGCAAAACC TATCTCGCTG GAGCGCCCAA
GACAATTTTG AGCTACAAGT GGGCAGTTTA AAGGGCAGTG GTAAGCTGCT CTATAAAGAT
GATGCGCCGC ACCTGCACCC ATTTATGTGG GAAAAACACC TACAGCCAGA CAATGACTTT
TTGACCTGTT ATGAAGACTT CAGCGCCTTT GCAGCAACCG ATGGTGCCAA CTACTCCATG
GCACTGTGCC CTGGTGATAA CAAAGAGCAG TGCGCGGGTA AGGGCTTAAT CAATCTGACC
TCGGTTGACT CAGAGCCTGC TGAACTCAAC TTAAAGAAGT TTGTTGAGCT ATCGAGTGCC
ATGGAGCAAC GCATTCGCTA TAACCGTGTC ATGCTGCCTG AAAGCAGCAA CACCAGCGGC
GCTTACTTAG AGCATAACTA CCAAGCAGAT GTGTATTTTC CCGTTAAAGA TGAGCTGCTG
ATCCGCGCCG ATATCAATAT GTCGTTGATC TATGACTCTG CCGATACCGG TGAGTTTTAC
TCCTCAACCT GCATCACCGA TCAAGACTGT TTAACCACGC CGATTAAGTA CAAGGTTCGC
GGTAAGTTTA AGCAGTATTC CGGCATGATA GATGACCTTA AGGTGGACAT TTTTCAGGTT
AAGGTTGAGC AGAAAGACCT GATCAAGCCC GATAAACTCA ATGACTCAGC GGTGCGTTTT
TATCGTGATT TGAGAAAGCG CGACTTTAAG GATAAAGAAC TCTATTTCAT CCGCGTTCAT
CAAGATCATA AGACAGCGGT GTGGACTATT CCGCTGTTTG GGCAAGTTAC GGCTTGGTAC
CACTATGAGA GGTTTGATAT CTGA
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| Protein sequence | MLKITPYLEF DTEANQLVDH VSGKRVILTF SESAVLHRLL LSSNPVCSKE ELLSAGWPDR
VVAVTSLTQC ISTLRKKLDP YREVQLKTIA RRGYQLHIST QSHVKLLAVN DAESMRAAFF
DVSLLVKISG IVIALLLLVL AWYFSDYHKI KQNLSRWSAQ DNFELQVGSL KGSGKLLYKD
DAPHLHPFMW EKHLQPDNDF LTCYEDFSAF AATDGANYSM ALCPGDNKEQ CAGKGLINLT
SVDSEPAELN LKKFVELSSA MEQRIRYNRV MLPESSNTSG AYLEHNYQAD VYFPVKDELL
IRADINMSLI YDSADTGEFY SSTCITDQDC LTTPIKYKVR GKFKQYSGMI DDLKVDIFQV
KVEQKDLIKP DKLNDSAVRF YRDLRKRDFK DKELYFIRVH QDHKTAVWTI PLFGQVTAWY
HYERFDI
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