Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4456 |
Symbol | |
ID | 6118812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5391875 |
End bp | 5393905 |
Gene Length | 2031 bp |
Protein Length | 676 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641636019 |
Product | cytochrome c, putative |
Protein accession | YP_001762803 |
Protein GI | 170728777 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACGGT GGAAACACAA GGTAGCATTA AGCGTGCTGT TTTGTTTTGG TGCCATTGCC AATGCGAACG CTGCTGGAAA ATATGACAGC ATCCCTCAGA TGGGAAAAAC CGCTAAAGCG GCGATGGCTG AATACGACGG TATGCAACAA GTTAACGGCG TAAAAACGCT GCAAGACTAT ATTGTTCAGG AAGAGGAGTT GTTTGATTAT CTATTCGAAA ACCACCCTGT ATTTAAGTAT CAGCAATCAG GTAATTTGAT TGGTGATTAC CATATCAGTG ACCGTGGCGA GGAGTACTTA GATACCGGCC ACAGCCCAAA TTATAGTGAG CGTGTTGGTG CGCCTCGCGC GGTTCAGTAC CGTTTAGGTG CTAAATCAAT TCTAGATTAT CCAAACAATT TTGTTGGTCC TGAAAAGTGT GCCGAATGTC ATGCGACTCA ATATGAGAAG TGGCAGCGTT CGCGTCATGC TAAAACAATT CGTTTCCCTG GTGAACACCC AGAGGTGGAT AACGACATTG AAAAGACCAT GTACAACACT AAAGATACCT CTATTTTGCC AGACGGTATT ACCCCTGACA TGATCTATGC AACCGTAGGT ACACCACGTA CTAAATACGG TTTCATCGAT GCCTGGCTAG TACGTGGTAC TTACCACATC AGAGACGGTC TACTGCGCGA CGGCACCGGT AAAATGGTTG CGGGTGCTAA CCAGTTCTCC CGTGGTTGGG CTGAGTGGCT AACCCCTGAG ATGTCTAAGA AGATTAACGA TGTTATCCCT GAGTTTCCAA TCACACTAGC TGGTTTCGGT GGTTCTGGTT CTCACCAGCA AGGAATGAGC TCTTACGGCG CTAAGTATGA AAAAGAGATG CTGTTCCAAC CAGCAAGCTC TTACTGTGAA GTGTGCCATA CCTTCAAGTT TGACTTCCAA AACAAGCAAG AGTTCTTCGA TGCATTAGGC GATCCTAAGA AGCTTCAAGA GCACACGATC TCTCGTGGTA TCGCTTGTGA AGAGTGTCAT GGCGCAGGTG GTCACTTAGA TGGCGGTACT GGCGGCATGC AGTCTAACTG TGAACGTTGT CACCAACGCT TCCAGTATGA TCCAACACTT GCTGACACGC CTCAAGCACA GGAAAAACGT GAATACGCCT TCGGTGTGAA GATGAAGTCA CTGTGTCCAT CATGTGGTAC TGAAGGTTCG CAGATGTATA ACTCTGTGCA CTACGAGAAG GGCATGCGTT GTACTACATG TCACGATCCA CACGAAGTGA CAGATGGCGA TTGGCAGTCT GGTTTCACTA CGCCAAAGCT GAAGAAAGAC TGTAAAGACT GTCACGAAGC GCAAACCTTG ATTGCTGAAA ACTCTGATAC TCACAATCAG CAAACTTGTC AAAGCTGTCA CATGCCTAAC ATGGGTAGCT GTGAAAACTT CAAGGCACTG CAGTTCCCTG ATCAAGCTGG TTTCGACGCA GTACGTAAGT CTCATATGTG GAAGATTCAG GTCGACCCAA CTCTGAAGAC ACTAAACCCA CCAGAAGGTG AGCCACGTAC TCAAGGTCCT GCGGCTGGTA AAGGCTGGAC TGTTGCGAAG AACGAAGAGG GTCGTAACTA TCTTGACTTG ATGTGGTCTT GTGCTCGTAC CTCAATCTCT GATCACGATG TGGTTGAGAA CAAAGGTTGT CACAGCCAGT TCCAGTCTGA GCTAGAGAAA GGCCTACATT ACGAAGACCA GTTAGAGATC TACGGTGAAG TAATGAAGAT GCAAACTCCT GTTAAAGAAG TTTTCTCGCA AGTTGAGCAA GCTCTTGTAC GCATCGACCA GCTATTAGAG GTGACCAAGC TGTCTACTGA AGACAAGACT CAGGTGCTAA TGCTAGCTGA GAAAGCGAAA GAGACTGTTG ATCTTATTAA GAAAGATGGT TCTTGGGGTG TGCATGGCTT CCGTTACAGC CAGAAGCGTC TAGATGCTGC ACTAACGTAT GTTACGCAAG CACAAAACAT TCTAGATGGA ACAGGTTACG CAGCTAAGTA A
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Protein sequence | MRRWKHKVAL SVLFCFGAIA NANAAGKYDS IPQMGKTAKA AMAEYDGMQQ VNGVKTLQDY IVQEEELFDY LFENHPVFKY QQSGNLIGDY HISDRGEEYL DTGHSPNYSE RVGAPRAVQY RLGAKSILDY PNNFVGPEKC AECHATQYEK WQRSRHAKTI RFPGEHPEVD NDIEKTMYNT KDTSILPDGI TPDMIYATVG TPRTKYGFID AWLVRGTYHI RDGLLRDGTG KMVAGANQFS RGWAEWLTPE MSKKINDVIP EFPITLAGFG GSGSHQQGMS SYGAKYEKEM LFQPASSYCE VCHTFKFDFQ NKQEFFDALG DPKKLQEHTI SRGIACEECH GAGGHLDGGT GGMQSNCERC HQRFQYDPTL ADTPQAQEKR EYAFGVKMKS LCPSCGTEGS QMYNSVHYEK GMRCTTCHDP HEVTDGDWQS GFTTPKLKKD CKDCHEAQTL IAENSDTHNQ QTCQSCHMPN MGSCENFKAL QFPDQAGFDA VRKSHMWKIQ VDPTLKTLNP PEGEPRTQGP AAGKGWTVAK NEEGRNYLDL MWSCARTSIS DHDVVENKGC HSQFQSELEK GLHYEDQLEI YGEVMKMQTP VKEVFSQVEQ ALVRIDQLLE VTKLSTEDKT QVLMLAEKAK ETVDLIKKDG SWGVHGFRYS QKRLDAALTY VTQAQNILDG TGYAAK
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