Gene Swoo_4456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4456 
Symbol 
ID6118812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5391875 
End bp5393905 
Gene Length2031 bp 
Protein Length676 aa 
Translation table11 
GC content47% 
IMG OID641636019 
Productcytochrome c, putative 
Protein accessionYP_001762803 
Protein GI170728777 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACGGT GGAAACACAA GGTAGCATTA AGCGTGCTGT TTTGTTTTGG TGCCATTGCC 
AATGCGAACG CTGCTGGAAA ATATGACAGC ATCCCTCAGA TGGGAAAAAC CGCTAAAGCG
GCGATGGCTG AATACGACGG TATGCAACAA GTTAACGGCG TAAAAACGCT GCAAGACTAT
ATTGTTCAGG AAGAGGAGTT GTTTGATTAT CTATTCGAAA ACCACCCTGT ATTTAAGTAT
CAGCAATCAG GTAATTTGAT TGGTGATTAC CATATCAGTG ACCGTGGCGA GGAGTACTTA
GATACCGGCC ACAGCCCAAA TTATAGTGAG CGTGTTGGTG CGCCTCGCGC GGTTCAGTAC
CGTTTAGGTG CTAAATCAAT TCTAGATTAT CCAAACAATT TTGTTGGTCC TGAAAAGTGT
GCCGAATGTC ATGCGACTCA ATATGAGAAG TGGCAGCGTT CGCGTCATGC TAAAACAATT
CGTTTCCCTG GTGAACACCC AGAGGTGGAT AACGACATTG AAAAGACCAT GTACAACACT
AAAGATACCT CTATTTTGCC AGACGGTATT ACCCCTGACA TGATCTATGC AACCGTAGGT
ACACCACGTA CTAAATACGG TTTCATCGAT GCCTGGCTAG TACGTGGTAC TTACCACATC
AGAGACGGTC TACTGCGCGA CGGCACCGGT AAAATGGTTG CGGGTGCTAA CCAGTTCTCC
CGTGGTTGGG CTGAGTGGCT AACCCCTGAG ATGTCTAAGA AGATTAACGA TGTTATCCCT
GAGTTTCCAA TCACACTAGC TGGTTTCGGT GGTTCTGGTT CTCACCAGCA AGGAATGAGC
TCTTACGGCG CTAAGTATGA AAAAGAGATG CTGTTCCAAC CAGCAAGCTC TTACTGTGAA
GTGTGCCATA CCTTCAAGTT TGACTTCCAA AACAAGCAAG AGTTCTTCGA TGCATTAGGC
GATCCTAAGA AGCTTCAAGA GCACACGATC TCTCGTGGTA TCGCTTGTGA AGAGTGTCAT
GGCGCAGGTG GTCACTTAGA TGGCGGTACT GGCGGCATGC AGTCTAACTG TGAACGTTGT
CACCAACGCT TCCAGTATGA TCCAACACTT GCTGACACGC CTCAAGCACA GGAAAAACGT
GAATACGCCT TCGGTGTGAA GATGAAGTCA CTGTGTCCAT CATGTGGTAC TGAAGGTTCG
CAGATGTATA ACTCTGTGCA CTACGAGAAG GGCATGCGTT GTACTACATG TCACGATCCA
CACGAAGTGA CAGATGGCGA TTGGCAGTCT GGTTTCACTA CGCCAAAGCT GAAGAAAGAC
TGTAAAGACT GTCACGAAGC GCAAACCTTG ATTGCTGAAA ACTCTGATAC TCACAATCAG
CAAACTTGTC AAAGCTGTCA CATGCCTAAC ATGGGTAGCT GTGAAAACTT CAAGGCACTG
CAGTTCCCTG ATCAAGCTGG TTTCGACGCA GTACGTAAGT CTCATATGTG GAAGATTCAG
GTCGACCCAA CTCTGAAGAC ACTAAACCCA CCAGAAGGTG AGCCACGTAC TCAAGGTCCT
GCGGCTGGTA AAGGCTGGAC TGTTGCGAAG AACGAAGAGG GTCGTAACTA TCTTGACTTG
ATGTGGTCTT GTGCTCGTAC CTCAATCTCT GATCACGATG TGGTTGAGAA CAAAGGTTGT
CACAGCCAGT TCCAGTCTGA GCTAGAGAAA GGCCTACATT ACGAAGACCA GTTAGAGATC
TACGGTGAAG TAATGAAGAT GCAAACTCCT GTTAAAGAAG TTTTCTCGCA AGTTGAGCAA
GCTCTTGTAC GCATCGACCA GCTATTAGAG GTGACCAAGC TGTCTACTGA AGACAAGACT
CAGGTGCTAA TGCTAGCTGA GAAAGCGAAA GAGACTGTTG ATCTTATTAA GAAAGATGGT
TCTTGGGGTG TGCATGGCTT CCGTTACAGC CAGAAGCGTC TAGATGCTGC ACTAACGTAT
GTTACGCAAG CACAAAACAT TCTAGATGGA ACAGGTTACG CAGCTAAGTA A
 
Protein sequence
MRRWKHKVAL SVLFCFGAIA NANAAGKYDS IPQMGKTAKA AMAEYDGMQQ VNGVKTLQDY 
IVQEEELFDY LFENHPVFKY QQSGNLIGDY HISDRGEEYL DTGHSPNYSE RVGAPRAVQY
RLGAKSILDY PNNFVGPEKC AECHATQYEK WQRSRHAKTI RFPGEHPEVD NDIEKTMYNT
KDTSILPDGI TPDMIYATVG TPRTKYGFID AWLVRGTYHI RDGLLRDGTG KMVAGANQFS
RGWAEWLTPE MSKKINDVIP EFPITLAGFG GSGSHQQGMS SYGAKYEKEM LFQPASSYCE
VCHTFKFDFQ NKQEFFDALG DPKKLQEHTI SRGIACEECH GAGGHLDGGT GGMQSNCERC
HQRFQYDPTL ADTPQAQEKR EYAFGVKMKS LCPSCGTEGS QMYNSVHYEK GMRCTTCHDP
HEVTDGDWQS GFTTPKLKKD CKDCHEAQTL IAENSDTHNQ QTCQSCHMPN MGSCENFKAL
QFPDQAGFDA VRKSHMWKIQ VDPTLKTLNP PEGEPRTQGP AAGKGWTVAK NEEGRNYLDL
MWSCARTSIS DHDVVENKGC HSQFQSELEK GLHYEDQLEI YGEVMKMQTP VKEVFSQVEQ
ALVRIDQLLE VTKLSTEDKT QVLMLAEKAK ETVDLIKKDG SWGVHGFRYS QKRLDAALTY
VTQAQNILDG TGYAAK