| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4363 |
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| Symbol | |
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| ID | 6118718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5274963 |
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| End bp | 5276066 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641635926 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001762711 |
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| Protein GI | 170728685 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTTA TCAACAGCAT CCGCAGAATA AAAGCCATCA CAGTCAAAGA GATCCGACAA
CTAAAACGAG ATCGTATTAC TTTTGGAATG GTGGTGATGA TCCCCCTGAT CCAACTGCTG
CTTTTTGGCT ACGCCATCAA CACAGATGTT CGCAATGTGC CCGTTGCCAT CGTCGATCAA
AGTGACTCGG CGGCAGGTCG CTGGATAGTT GAAGCGATTA AAGTGACTCA GGTTGTCTCC
GTCGAAGCCT TTTATAAAAC AAGCACAGAG GCGGAGGCTG CTATCACTCG CGGTGAGATA
CGAGCCGCAC TTATCTTACC CCCTAATCTC ACCGAAAAAC TCGCCAACAA TGAAACCTTA
GGCCAGTGGA TAGTCGATGG CTCAGATACC ATGATCGCCG GTGCTATGAA GCAGCTGAGA
AACATGCCGC TGGATCAGAT AACTGGCATC AATACTCAAA AGCCTGCCAC CTTTGAGGTT
GCCCTCTTCT ACAACCCTGA GCAGCGATCT GCAGTTAATA TCGTGCCAGG GCTAATCGCG
GTTATCCTCA CCATGACCAT GATCCTGTTC ACCTCGGCAG CCATAGTTCG CGAGCGTGAA
AAGGGGAATT TGGAGCTATT GATCACCACC CCAATCAAGC CACTGGAACT GATGCTGGGT
AAGATTCTGC CCTACATTAT TGTGGGTTTG ATCCAGATGA CTATTATTTT AGGGCTGGGG
CATTTTATCT TCGATGTACC AATAAATGGC TCTCTAGCAC AACTGCTTAT GGGCACCTTG
CTCTTTATCG CCGCCAGTTT AACCTTAGGG CTAATTATCT CGACCATAGC TCGAACTCAA
TTACAGGCGA TGCAGATGAC CATCTTTATC ATACTGCCCA CCATCTTACT GTCAGGCTTT
ATGTTTCCTT TTGAAGCCAT GCCAAAACCC GCCCAATGGA TTGCAGAGAT CTTACCTGCG
ACTCACTTTA TGAGGATCAT TCGCGCCGTA GTACTTAGAG GGGGAGAGAT AGGCGATATG
CCCTTCGATA CACTCTGGTT AGTGGGCTTT ACTGTAATTG GAATTATTAT CGCCTCACTG
CGATTCAATA AGCGTTTGGA TTAG
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| Protein sequence | MSFINSIRRI KAITVKEIRQ LKRDRITFGM VVMIPLIQLL LFGYAINTDV RNVPVAIVDQ
SDSAAGRWIV EAIKVTQVVS VEAFYKTSTE AEAAITRGEI RAALILPPNL TEKLANNETL
GQWIVDGSDT MIAGAMKQLR NMPLDQITGI NTQKPATFEV ALFYNPEQRS AVNIVPGLIA
VILTMTMILF TSAAIVRERE KGNLELLITT PIKPLELMLG KILPYIIVGL IQMTIILGLG
HFIFDVPING SLAQLLMGTL LFIAASLTLG LIISTIARTQ LQAMQMTIFI ILPTILLSGF
MFPFEAMPKP AQWIAEILPA THFMRIIRAV VLRGGEIGDM PFDTLWLVGF TVIGIIIASL
RFNKRLD
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