Gene Swoo_4325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4325 
Symbol 
ID6118680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5239362 
End bp5240255 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content47% 
IMG OID641635888 
Producthypothetical protein 
Protein accessionYP_001762673 
Protein GI170728647 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.946347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTAA GCCACGCCCT CAGTCTCCTC TTTAGGTATG TTTTATCTAT AGGCGCTCTT 
ACCTTTGCAG TAAGCAGCAC AGGCTTGGCT GCTGAACCTA ACTCAAGCAA CTCAAAGTAC
AGCTACCTTC CAAGTGAGGA GGTGATCTCT ATCGATGTGG GTCAACAGAA ATCAGAGGTT
TTGGTACGCA GTTGGATGGG GAAAAAGAAG CTAGGTGCTG CCATCATCTT CTCCAACCCT
GGAATGACAG CCGATTCAGC GGGATTACAG GCTTTCTTAA GACGTGAGCT CCCCCATACA
GGCTGGGCCA GTATCGCTAT TACGCCACCC AACAAGGTAT CCACACCTAA CTTTGCCACC
TCTCCTGAAG AGGTATCAAA AGCGGGTGAG GGAAACAATG ACAAGGATGG TAGTGAGCGG
GTACCTCAAT ACTCGAAGGA GCAGTGGGTC AAGATCAGAG AAAAGCAGGA GGAGTTTATT
GTCAATACAA TGAATAAGCT CGATGAGATA GGCTCCCCCT ACCAAGGTAA GCGAATTCTT
ATCACCACAG ATCAAGGAGC CGGATTTGTT ATCTCAATGC TGAGTAAGAG TAAGCTGCCT
AAACCTGACA TATTAGTGCT CATCAATCCC TTTATGAGCA CTAAAACAGA AAATATGGCG
CTACCTAAAC AGCTGGCTGA ACTGGATATT CCAATACTGG ATATTCAGTC TTCAGATGGT
CATTATGCGT CTCAAGAGAC CGTGACTGAG CGCCGGTTAC TCTCCCCTCA CAATGAGCCC
TATCGCTATA GTCAACAACT GATGCAGCTT AACCTGAATC AGGCTGGCGC CTGGCAAACC
TGTTTAGATC TAATAGAGGC CTTCGCCCAC CGTATCAATA AAGCTTACCC ATAA
 
Protein sequence
MNLSHALSLL FRYVLSIGAL TFAVSSTGLA AEPNSSNSKY SYLPSEEVIS IDVGQQKSEV 
LVRSWMGKKK LGAAIIFSNP GMTADSAGLQ AFLRRELPHT GWASIAITPP NKVSTPNFAT
SPEEVSKAGE GNNDKDGSER VPQYSKEQWV KIREKQEEFI VNTMNKLDEI GSPYQGKRIL
ITTDQGAGFV ISMLSKSKLP KPDILVLINP FMSTKTENMA LPKQLAELDI PILDIQSSDG
HYASQETVTE RRLLSPHNEP YRYSQQLMQL NLNQAGAWQT CLDLIEAFAH RINKAYP