Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4315 |
Symbol | |
ID | 6118670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 5221891 |
End bp | 5224977 |
Gene Length | 3087 bp |
Protein Length | 1028 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641635878 |
Product | acriflavin resistance protein |
Protein accession | YP_001762663 |
Protein GI | 170728637 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.142396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTTG CCGAATACGC CATAAAACAT AAAGTCGTCA GCTGGATGTT TGCCCTACTA CTGCTAGTCG GTGGTAGCAT CTCATTTCTT GGTTTGGGAC AACTTGAGTT TCCTGAATTC ACCATTAAAC AGGCGCTGGT TGTCACCGCC TACCCCGGAG CCTCACCAGA ACAGGTTGAG GAGGAGGTAA CCCTTCCCCT TGAGGATGCC CTGCAGCAGC TCGATGCGAT AAAACATATC ACCTCAGTTA ACAGTGCTGG CTTATCTCAG ATAGAGATTG AGATTAAAGA GAACTACGAT GCCACAGAGC TTCCTCAGGT ATGGGATGAA GTGCGCCGTA AGGTCAACGA TAAGGTCAGT TCACTACCAC CTGGAGTGTT CACTCCCTCG GTTATTGACG ATTTTGGCGA TGTATATGGC ATTTTACTTA ACGCTAGCGG TGATGGTTAC AGTAATCGTG AACTACAAAA CTATGCAGAC TTTCTAAGGC GCGAGCTTGT GCTCGTCGAC GGTATAAAGA AGGTCACTAT CGCCGGTAAA ATAGATGAAC AGGTGATGGT TGAGATATCT CAGCAAAAAC TCAACGCCAT GGGACTCGAT CAAGACTATA TCTATAGCCT AATCAATAGC CAGAATGTAG TTTCAAATGC AGGCAGCATA AGGGTCGGTG ACAGCCGGAT CCGAATTCAT CCCACTGGAG AGTTCACTCA GGTAGAGCAG ATGGAGCGCC TGCTTATCAG TAAGCCTGGC AGCACCAAAT TGGTTTATTT AGGCGACATC GCCAAAATTT ATAAAGCGTT AGATGAAACG CCGGATAATA TTTATCACGG TAACGGGCAA GATGCACTTT CAATTGGCAT CGCCTTTTCC AGTGGAGTCA ACGTGGTTGA AGTCGGTAAA GAGGTCAACG CTAGACTTGC ACAGCTCGAC AGCGAGCGCC CTATCGGTAT CGAATTAACC ACAGTGTATG ATCAAAGTAA GATGGTTGAT CAGACCGTCA GCGGCTTTTT GATCAATCTG GCTGAGTCCA TCGCCATTGT GATCGGCGTA CTGCTTATCT TTATGGGAGT GCGATCTGGC CTACTGATGG GGTTAGTCTT ACTGCTGACC ATACTGGGCA CATTTATCGT GATGAACATA CTCAATATTG AGTTACAGAT CATCTCACTC GGTGCCCTTA TCATCGCTTT AGGTATGCTG GTCGACAACG CTATTGTCGT TACCGAAGGG ATCTTAATCG GGATCAAGCG GGGTCAAACT CGACTAGAGA CCGCCAAAGA GGTGATCACT CAAACTCAGT GGCCTTTGCT AGGCGCGACA ATAATTGCCA TTATCGCCTT TGCACCTATC GGCCTGTCAG ATAACGCCAC CGGTGAGTTT TGTGCCTCCC TATTTCAGGT GCTGTTGATC TCGCTGTTTA TCAGCTGGAT AACCGCCATG ACCCTCACCC CCTTCTTCTG TAACTTGATG TTTAAAGATG GTGAGGTGAG TGAAGATGAA GATAACGACC CATACAAGGG TTGGTTATTT CAGCTCTACC GTAGCAGCCT CAACTTAGCG ATGCGTTTTC GAGTGATCAC CCTGTTACTT GTAATTGGTG CGCTTATCGG CTCTATGGCG GGAGCGGGTA ACCTGAAAAA TGTCTTCTTT CCAGCTTCGA ACACACCTAT GTTTTTTGTC GATGTGTGGA TGCCAGAGGG CACAGATATT AAGGCGACAA AACAACTTTT CAGCCGAATT GAGAAAGATC TTTTACAGCA ACAGGCCGAG CAAGATATTG GCTTGGTCAA CCTCACTAGC GTAATAGGTC AAGGCGCGCA AAGATTCGTG CTCTCCTACG TCCCTGAAAA AGGCTATAAC GCCTATGGTC AGCTATTGAT AGAGATGACA GATCTTGTGA CCTTAAACCG CTATATGCGG ATCTTAGAAA GTGAGCTTAG CCACAAATAT CCAGAGGCAG AGTATCGCTT TAAGTATATG GAAAACGGCC CAAGTCCAGC AGCCAAGATT GAAGCCCGTT TCTTTGGTGA AAACCCAGCA GTATTAAGAG CACTGGCCTC ACAGGCTGAA GCCATCTTAA AGGCTGAGCC AACCGCCGTT GGTGTTAGGC ATAACTGGCG TAATCAAGTC ACCCTTATCC GCCCTCAACT AGCACTGGCA CAAGCTCGTG AAACAGGGAT AAGTAAACAA GATCTCGATG ACTCATTGCT AGTGAATTTT AGCGGTAAAC AGGTGGGCGT ATATCGCGAA AATAGCCATA TAATGCCGAT AATTGCCCGA GCTCCCGACA GTGAACGACT CGATGCTGAC AGCATGTGGA AACTGCAGAT CTGGAGCGCC GATAACAACG TCTTCGTGCC TGCAACTCAA GTGGTGTCAG AGTTTTCCAC TGAGTGGGAA AACCCCATCA TCATGAGACG AGATCGTAAA CGTGTACTTG CAGTACTGGC CGATCCGATC AACGGCAGCG ATGAGACCGC TGACTCAGTA TTTAGAAAAG TCCGCAGTGA TATCGAAGCG ATCCCTCTAC CAGCTGGCTA TGAGTTGGAG TGGGGTGGAG AGTATGAGAC AACTATCGAA GCACAAGCTT CGGTCTTTAG CTCAATCCCC ATGGGGTATC TGGCGATGTT TATTATCACT GTTCTACTGT TTAACTCTGT CAGACAGCCG CTAGTGATCT GGTTTACCGT GCCGCTCTCA GTCATAGGAG TGGTATCTGG TCTACTGATT TTTGATGCGC CATTTAGCTT TATGGCACTA CTGGGCCTAC TGAGTTTAAC TGGCATGATA GTGAAAAACG GCATTGTTTT GGTTGACCAG ATAAATCTGG AATTAAGCAG CGGGAAAGAT CCCTACTGGG CAGTGGTTGA CTCCTCTGTG AGTCGTGTAC GCCCAGTACT AATGGCAGCT ATCACGACAA TGCTCGGCAT GGTTCCCCTG CTATCCGATG CCTTTTTTGG TTCAATGGCG ATCACCATTA TCTTCGGGTT AGGCTTCGCA TCAGTATTAA CCTTAATCGT ACTGCCAGTG ACCTACACCT TAGTGTTCCG TATTCCTTAT TTAGGAGATA GGAAACTTGT GAAATAG
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Protein sequence | MNFAEYAIKH KVVSWMFALL LLVGGSISFL GLGQLEFPEF TIKQALVVTA YPGASPEQVE EEVTLPLEDA LQQLDAIKHI TSVNSAGLSQ IEIEIKENYD ATELPQVWDE VRRKVNDKVS SLPPGVFTPS VIDDFGDVYG ILLNASGDGY SNRELQNYAD FLRRELVLVD GIKKVTIAGK IDEQVMVEIS QQKLNAMGLD QDYIYSLINS QNVVSNAGSI RVGDSRIRIH PTGEFTQVEQ MERLLISKPG STKLVYLGDI AKIYKALDET PDNIYHGNGQ DALSIGIAFS SGVNVVEVGK EVNARLAQLD SERPIGIELT TVYDQSKMVD QTVSGFLINL AESIAIVIGV LLIFMGVRSG LLMGLVLLLT ILGTFIVMNI LNIELQIISL GALIIALGML VDNAIVVTEG ILIGIKRGQT RLETAKEVIT QTQWPLLGAT IIAIIAFAPI GLSDNATGEF CASLFQVLLI SLFISWITAM TLTPFFCNLM FKDGEVSEDE DNDPYKGWLF QLYRSSLNLA MRFRVITLLL VIGALIGSMA GAGNLKNVFF PASNTPMFFV DVWMPEGTDI KATKQLFSRI EKDLLQQQAE QDIGLVNLTS VIGQGAQRFV LSYVPEKGYN AYGQLLIEMT DLVTLNRYMR ILESELSHKY PEAEYRFKYM ENGPSPAAKI EARFFGENPA VLRALASQAE AILKAEPTAV GVRHNWRNQV TLIRPQLALA QARETGISKQ DLDDSLLVNF SGKQVGVYRE NSHIMPIIAR APDSERLDAD SMWKLQIWSA DNNVFVPATQ VVSEFSTEWE NPIIMRRDRK RVLAVLADPI NGSDETADSV FRKVRSDIEA IPLPAGYELE WGGEYETTIE AQASVFSSIP MGYLAMFIIT VLLFNSVRQP LVIWFTVPLS VIGVVSGLLI FDAPFSFMAL LGLLSLTGMI VKNGIVLVDQ INLELSSGKD PYWAVVDSSV SRVRPVLMAA ITTMLGMVPL LSDAFFGSMA ITIIFGLGFA SVLTLIVLPV TYTLVFRIPY LGDRKLVK
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