| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4313 |
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| Symbol | |
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| ID | 6118668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5219665 |
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| End bp | 5220609 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635876 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001762661 |
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| Protein GI | 170728635 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000168555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACTG AAGATATCGC CCTGTTTCAT CGTATTGTAG AAACTGGCAG TCTAGTGGAA
GCGGCCGATC TGCTTAATCT ACCCAAATCT ACCGTGAGTC GTCGTTTGCA GATCTTAGAG
GACGATCTCA ACATCAAGTT ATTTCATCGC CAGAGTCGTT CTATGACGTT AACGGCGTCG
GGCAGCCATT TTTACGATAA AACCTTGTCC ATTTTAGGGG ATCTTGAGCA GACCCTTGTG
GAGTTGACCG ACACGGAAGC GGAGATCGAT GGGCACCTAC GCATTCTTAT CTTTCCAGTG
CCTGAGTTAC TCGATATTGC CAACGGCATC TTTGACTTTA TGGATCATAA CCCTGAGCTA
ACGGTGGAAC TGATTGTTAG CACTGAGCCT CAAGATATGA TCCGCAACAA TATCGATCTT
GCCTTTATGG TCGAGGATTC ATTTAATGAA AATGAGATGG TGGCTCGAGA GATGATAACT
GAAGAGCTGC ATTTTGTTGC TAGCCCAGAT TATCTGGCTA AAGCGGGAAC GCCTGTGTTA
CCTGAAGATC TCGCAAAACA TAACTCAATT CTGTTTCGAT ATCCTAATGG GCGAATTTTC
AATGAGGTGC CATTTGGCAA CGACATGAAA ATCGCAGTGA AGGGAAACTT ATGCCTCAAC
AGCATTCAGC TCTGTTTAGA GGCGAGTTTA ACTGGACGTG GTATCGCCTT TCTTCCCATA
GAGTTGACCC GAGATCACGT TGAGCGTGGT GAGTTAACCA TGTTGTTTGA AGATGTAGAG
CCCTATGTGG GCAAGTGCTA CTTAGTTTAT CCCTCAAGGC GCTTTATCAG CCTAGCCAGT
CAGCGATTTA TCGATCATAT GATGAGTGCC CTCGAAAGCT GTAATGCAGG AAAAGGCTGT
GGTCGTGAAG AGAGGTTACG TGGCTCTATT AAGTCTTGGA TATAA
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| Protein sequence | MKTEDIALFH RIVETGSLVE AADLLNLPKS TVSRRLQILE DDLNIKLFHR QSRSMTLTAS
GSHFYDKTLS ILGDLEQTLV ELTDTEAEID GHLRILIFPV PELLDIANGI FDFMDHNPEL
TVELIVSTEP QDMIRNNIDL AFMVEDSFNE NEMVAREMIT EELHFVASPD YLAKAGTPVL
PEDLAKHNSI LFRYPNGRIF NEVPFGNDMK IAVKGNLCLN SIQLCLEASL TGRGIAFLPI
ELTRDHVERG ELTMLFEDVE PYVGKCYLVY PSRRFISLAS QRFIDHMMSA LESCNAGKGC
GREERLRGSI KSWI
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