| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4279 |
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| Symbol | |
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| ID | 6118634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5183141 |
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| End bp | 5184529 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635845 |
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| Product | aminotransferase class V |
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| Protein accession | YP_001762630 |
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| Protein GI | 170728604 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAACG ATAATAAAGA TGTCGCATCA GGTTTAAACC GCCGTAGTTT TTTAAAAACA
TCTACAGGCT TAGTACTGGC AGGGGCTGGT ACTATGATGT TTCCATCGGT CGCAGCAGCT
AAAGCAGATG AGCTAGGACC TACCCAGTTT AGAGGTCATA ATTCAGACCA TAAACTGTGG
AAAAAAGTGC GTAAAGAGTT TGTGCTAAAC AAGCGCACAA CTTACATGAA CGTAGGTACA
TCAGGCTCTA TGCCAAAGAG CATTTTAAAA TCTTATGCTA AAACTAATGA GATGATCTCT
GCCAATCCTT GGCAGAGCAA CATTCCAACC ATTGAGCTAG CTAGGCAGGT CGCGCCTGGT
TTCGGGGCCG ATGAGCATGA ACTAGTTTTG AGCCGCAACA CGACTGATGG CATGAACTCA
ATCATCAATG GCCTCCAGTT TGAAGAGGGG GATGTCGTTT TAACCACTCA CCACGAGCAT
CCAGGTGCAA CCATTCCACT TAAACATGTA AGTGAGCGCT ACAATGTTGA AGTGGTTGAG
GTTGAGATCC CTGTATATAC AGGCGAAAAC CAAGTATCTG AAGATGACTT TGTTAATGCA
TTTGCCGATG CAGTCGCAGA GTACGGTAGC CGCGTTCGTC TGATCGTTTT CTCTCATGTA
ACTTATACAA CAGGAACCAG TTTACCTGCT AAGCGCATCT GTAAAGAAGT GGCGATCCCT
AATCGTATTC CTACTTTAAT CGACGGTGCC CACACCCCTG GCATGCTAAA CCTGAACTTC
CATGATATCG ACTGTGACTT TTACTCAGGT GCGGGTCACA AATGGCAGTG TGGCCCAGGT
GCAACTGGCA TCTTATATAT TCGCGATAAC GCGCAACGCT TAGCTGAGTT TTGGAACGAT
CGTCCAACAC CGCTTTGGTG CATCAACTCA TCTTCGTCCT CTACCGCTAT ACAGGCTAGA
TTCCAGTCTA TCGGCCAAGA TAACTACCCA GCAAAGCAAG CCTTAGCTGA CGCTTGTGCT
ATGTGGGAGG AGATTGGCAG AGATGTAATT GAGGAGCGAG TGCTGGATCT AAGTGAGCTT
TGTAAACAGG AGTTGTTTGA TACCTTCCCC TATGCAAACT TCTATGCGCC GAACATCCGT
GAGCTATCAA GTGGCCTAAC AACGTTTAAC CCATTCTACG ATCAACATGA TGGCGAACTG
TTAACCCAAT TCCGCGATCG TCTGCATGAG GAGTATGGTT ACATAGTCCG TACCACCTCT
TTCTATAACA AGAAAGATGA TATGCAAAAA ATCCAAACCA TCCGCATCTC GACTCACCTT
TTCCACGATG AAGATGATGT AATTGGGTTA GTTAAAGCGA TGAAACGTCT TTATCGCAAC
ATGGCTTAA
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| Protein sequence | MNNDNKDVAS GLNRRSFLKT STGLVLAGAG TMMFPSVAAA KADELGPTQF RGHNSDHKLW
KKVRKEFVLN KRTTYMNVGT SGSMPKSILK SYAKTNEMIS ANPWQSNIPT IELARQVAPG
FGADEHELVL SRNTTDGMNS IINGLQFEEG DVVLTTHHEH PGATIPLKHV SERYNVEVVE
VEIPVYTGEN QVSEDDFVNA FADAVAEYGS RVRLIVFSHV TYTTGTSLPA KRICKEVAIP
NRIPTLIDGA HTPGMLNLNF HDIDCDFYSG AGHKWQCGPG ATGILYIRDN AQRLAEFWND
RPTPLWCINS SSSSTAIQAR FQSIGQDNYP AKQALADACA MWEEIGRDVI EERVLDLSEL
CKQELFDTFP YANFYAPNIR ELSSGLTTFN PFYDQHDGEL LTQFRDRLHE EYGYIVRTTS
FYNKKDDMQK IQTIRISTHL FHDEDDVIGL VKAMKRLYRN MA
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