Gene Swoo_4274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4274 
Symbol 
ID6118629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5179314 
End bp5180102 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content43% 
IMG OID641635840 
Producthypothetical protein 
Protein accessionYP_001762625 
Protein GI170728599 
COG category[R] General function prediction only 
COG ID[COG4798] Predicted methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTAC CTATTTTGGC AGGCTTGATT GCAGGCATTA GTTTAGTGTC TGTTGATGCG 
GCTCCGCTGT CGTTAAGCGA ACTTAACGGG ATTTTAGTAA GCAGTGATCG TCCAGTAAAA
GATAGTGAGC GGGATGCTGC GCGTAAACCG GCGCAAGTGA TGTATTTTTC TGGCGTCGAG
GCTGGCGATA ACGTCTTAGA CTTGTTTGCT GGTGGTGGTT GGTATTCCGA GCTCTTCTCC
AAAGCTGTGG GGCCTAAAGG TAAAGTGTAT GCTCAAAACG ACAATGTGAT TTGGCGTTTT
GCCGAAAAGC GTATTAATGA GCGCACAAAG GGAGATCGAT TGGCGAATCT GACGCGTTTC
GATAAAGTTG ATATTGTCGA TATGGATATT CCAGCAAAGA GTCTCGATAT TGCCTTTACT
GCATTGAATT ATCATGACCT TTTCTTTACT CATAACGTAG ATGAGAAAAC CGGAAAGAGA
ACTCAGTTCC GTAAACAGGC GGTGGATCAT AGAGCTGCAT TGGCTAAGGT GCGCGACTCA
CTCAAAGATG ATGGTGTGTT TATCATTATC GATCATGAAG CGATTAAGGG ATCTGGCTAT
GATGCCCCTA ATTCTGAACA TAGAATCGAT TCAAATATTG TGAAGTATCA GATGAAGGAG
GCTGGCTTTA AGCTTGTAGA GGAAGCCTTT TATCTGAGAA ATCCTGATGA TGATCTCTCT
ATGAATGTGT TTGAAAAAGA GACACGAGGT AAGACTGACA GATTTATCTA TAAGTTTGTG
AAGACCTAA
 
Protein sequence
MRLPILAGLI AGISLVSVDA APLSLSELNG ILVSSDRPVK DSERDAARKP AQVMYFSGVE 
AGDNVLDLFA GGGWYSELFS KAVGPKGKVY AQNDNVIWRF AEKRINERTK GDRLANLTRF
DKVDIVDMDI PAKSLDIAFT ALNYHDLFFT HNVDEKTGKR TQFRKQAVDH RAALAKVRDS
LKDDGVFIII DHEAIKGSGY DAPNSEHRID SNIVKYQMKE AGFKLVEEAF YLRNPDDDLS
MNVFEKETRG KTDRFIYKFV KT