| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4273 |
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| Symbol | |
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| ID | 6118628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5177746 |
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| End bp | 5179245 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641635839 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_001762624 |
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| Protein GI | 170728598 |
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| COG category | [K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAAT TTTTAAAGAA TTTATTTTCT TCATCGAAAA AGCAGACAAC CGATAATAGC
TCAAGCGAAA AGCTTAAAGA ACAGAAGATG CAGGAAGCTC TCTCGGCAGC TGGCAACAAA
GCCGTTGAAA ATGTATTAGG TCAATCAGTA GATGCTGTGA TCATGATAGA TGGAAACAAC
AATGTGACCT TTGTCAATGA TGCCGCCATC AAGATGTGGG GATACCGTAA AGAGGAGGTC
ATAGGTAAAA ATGTCAAGAT GTTGGTCCCT CAAGAGCTTC AATCTCAACA TGATGGATTT
GTAAATAAAA ACAGGCGTAC AAAAGAAGAC ATCATAGTAG GTACTAGCCG CGACGTGGAA
CTTGTTCGCA AAGATGGCTC TAAAACATGG ATTAACCTAG CTCTATCCAG ATTAGAAAAC
GAAGGAGAGA TAGGCTACGT CGGCTTTGCC AGAGATATCA GCGCCCAACG CCAAGCCAAT
GATACCATTC AGCAGGTTCT CGAGCAGGCA CTCGATGGGG TTGTCACCAT AGATAGCCAG
AACATCGTTA CTTTTATGAA CTCAGCAGCA GAAAACTTAT GGGGGATCAC CAGAGAGGAG
GTCATAGGAA AAAACGTTAA AATGTTGGTG CCCAGTGAGA TAAGAAGCAA TCATGATGCA
CTAGTCAATG CCAACCGCAA TACAGGTATC AATAAGATAG TTGGAACCAG CCGAGATCTC
GACCTCATCA GGGTTGACGG TAGTACGATT CAAGCAAACC TCTCACTTTG TAAAATAGAG
GTAGGTGGCA ATATAGGTTA CACCGCCTTT GTCCGAGATA TTACTGAGGC TAAACTTGCT
CAAGACGCCA TAGATCAAAC TTTAGAGCAA GCATTAGATA GTGTTATCTC CATCGACGAA
AATAATATTG TGACTTTATT CAACAAGGCC GCAGAAGAAC TCTGGGGTTA TAAAAGAGAG
GAAGTCATAG GCCAAAATGT AAAAATGTTA GTTCCAGTAG AACTGCAAGC AGGCCATGAT
GGACTGGTCA ATGCCAACCG AAATACCGGC GTTAACAAGA TTGTCGGTAC CGTTCGAGAG
GTGCCTGTTT TCTGTAAAGA TGGCAGTAAA AAATGGGGCT CACTCTCCCT CTCAAAAGTC
GAAGTCAGTG GACGAATCCT CTACACAGCC TTCGTCAGAG ACGTCACCGA AGAGGTAGAG
ATGCGTGATG GCATGAATGA GATCATGGCC AACGTAGCCA AATCCAGCAA TGAAATCGCA
GATATCGCCA AAGTTATCGA TGGGATCTCA AACCAAACCA ATCTACTTGC CCTTAATGCC
GCTATTGAAG CGGCGCGTGC AGGCGAACAT GGCCGAGGCT TTGCAGTCGT AGCCGATGAA
GTACGCCAGT TAGCTTCTCG CTCTTCAGAG TCGGTGACTG AGATCAATAA GTTGTCAGAG
GAGACTCAGC GTTTCCTAAA AGATCTCGCG ATAAACCTCA AACTAGATAA TTCTAATTAG
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| Protein sequence | MTKFLKNLFS SSKKQTTDNS SSEKLKEQKM QEALSAAGNK AVENVLGQSV DAVIMIDGNN
NVTFVNDAAI KMWGYRKEEV IGKNVKMLVP QELQSQHDGF VNKNRRTKED IIVGTSRDVE
LVRKDGSKTW INLALSRLEN EGEIGYVGFA RDISAQRQAN DTIQQVLEQA LDGVVTIDSQ
NIVTFMNSAA ENLWGITREE VIGKNVKMLV PSEIRSNHDA LVNANRNTGI NKIVGTSRDL
DLIRVDGSTI QANLSLCKIE VGGNIGYTAF VRDITEAKLA QDAIDQTLEQ ALDSVISIDE
NNIVTLFNKA AEELWGYKRE EVIGQNVKML VPVELQAGHD GLVNANRNTG VNKIVGTVRE
VPVFCKDGSK KWGSLSLSKV EVSGRILYTA FVRDVTEEVE MRDGMNEIMA NVAKSSNEIA
DIAKVIDGIS NQTNLLALNA AIEAARAGEH GRGFAVVADE VRQLASRSSE SVTEINKLSE
ETQRFLKDLA INLKLDNSN
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