| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4249 |
|---|
| Symbol | |
|---|
| ID | 6118604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 5148470 |
|---|
| End bp | 5148898 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641635815 |
|---|
| Product | GtrA family protein |
|---|
| Protein accession | YP_001762600 |
|---|
| Protein GI | 170728574 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2246] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000330424 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000113539 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGTGGCAAG TAGGTGGGCT TGTTGTCAGA GTTAAAGGGG CGTTCACTTT GACTCAACTG
AAGTTTTTAT TGGTGGGAGG AGGAAGTTTT GTTGTCGATA TATTACTGTT TCTCTATCTT
TCCCAAGTGC TTCATTGGCC AATTTCCCAC GCAAGATTGA TGGCATTTTG TGTCGCTCTA
CTGCTCACTT GGATAGGGAA TCGGTTATTT ACCTTCTCCC ATCGCAAGAG GCGACCAATC
GGCACACAAG TTTTGATGGC GGCTCTGCTT GCATGCTGTG CAGCTTGCGT TAATCTCAGC
GTGTTTTATC TATTGAGTGA ATTGAGAGAG CCAAGTGGAC TCACCGGTCC CGTTTATCTG
GCGTTAGGTG TATTGTCAGG GCTGGTTGTG AACTGGCTGG GATCTAACCT TTTGGTGTTT
CGCCATTAA
|
|---|
| Protein sequence | MWQVGGLVVR VKGAFTLTQL KFLLVGGGSF VVDILLFLYL SQVLHWPISH ARLMAFCVAL
LLTWIGNRLF TFSHRKRRPI GTQVLMAALL ACCAACVNLS VFYLLSELRE PSGLTGPVYL
ALGVLSGLVV NWLGSNLLVF RH
|
|---|
| |