| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4114 |
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| Symbol | |
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| ID | 6118464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4998925 |
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| End bp | 5001036 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641635675 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001762465 |
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| Protein GI | 170728439 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAA TATACTACCC CATACTTTTT AGCATAAGCA TGATGCCTAT TGGTATGCTT
TGGGCGAACG CTGAAGAAAC AGAAGAAAAC ATAGACATTC AAGGTATTGA GGTCATTCAA
GTTACAGCCC GTAAACGCAC TGAGTCACTG CAAGAGATCC CCGATGCAGT CACCGCCTTC
AGTGAGTCAG ATATCGAATC TGCCCGCATT GAACAAGTTA ACGATTTCAT CAATCTAACA
CCCAATGTGA TCTTCCGAAA AACCTTCAGA GCAGGAGCCT CATTTATCAC CATGAGAGGA
ATTACCGGTA CCCAACAAGG TTTACCACCT GTTACCTACG TGGTTGATGG AGTTCAGGTC
GGATCTGCTG ATTTCATCAA CCAAGATATG GGAGAGATTG AACGTATTGA AGTACTGCGT
GGTCCACAAG GCGCCCTTTA TGGTGCAGGA GCTATGGCTG GTGCCATCAA TGTGATCACA
AAAGCCCCCA CAGAGGAACT TTCTGGAAAA ATAAAAGCTC AGTATGCAGA GGGTAATGAC
AAGAGCGTCA GTGGCTATAT AAGCGGTGGC GTTAGTGAGA ACATCTTTGG CTTAGTCTCT
GTTGGTGCCC GAAAATCTGA TGGATTGATT GACTCATCGA CTGGTGAGGA TCTCGACTTT
AATGATACCA AACGGATTAA AACCCGCTGG CAGTATCTTG GTGATGAATT TAGCGCCGAT
CTTAGATTAG GCTACGCCAG CTATGAACAG GGAGCAGTGA TGCAAGATCT ATTGGCAAAA
GGAGAAGAGT TTGTTGATGC TCAAAAAACC GATCTAGATG ACTTTTCAGG TTCAGGACCA
GAACGAAGCT TTATAGGGAA AGAGAACCAA ATATTTAAAG ACGCCTCAAT CAAGCTTGAT
TATGACTTCG ATAATATGAC ATTCACTTGG ATTAGCTCCT ACCAAGACGC AGAGCAAGAT
CTAATTGGCG ATCTTGATTG GAGCTCAGCT AACATATTCT TGCAAGATTT AGTCGATAAC
TTCGATGTCA CTAGCCATGA AGTAAAACTG ACTTCAAACA ATGATTCCGA TCTACGCTGG
CTTGCAGGGG CTTACTATCA AAAACGTAAT GGTCTCAATC AACTACGTAT CCGACTTGAG
CCAACTGTAG GTGTTATCGG AGATTCAATA TTCGATCAAG TCGATGTCAA AGAGGACACC
ATCAAAGCTG TATTTGCACA ACTTAACTAT GATATTACTG ATAAATTAGA GCTGACGTTA
GCCGGGCGTT ATGATCAGGT TGATTACCAA AGCACTCGTT TTAAAACACC TGAACAACAG
GAGATAGTCC CACTTCCAGA TGCTAATGGC CAGCTACAAG ATACCTTAAC GGAGTCTGAC
AGTTCTTTCC AACCAAAGGT TTCTCTCTCC TATGATATTA ACAGTGATAG CATGATCTAC
GCGACCTATG CAAAAGGCTT TAGACCTGGG TTTTATAACT CAGGTAATCT TACAAAAGCC
GAAACAACCC AAAATTTTGA AGTGGGCGGA AAATCAACCT GGTGGAACAA TCGTGTTCAA
ATAAATGGTG CAATTTTCTA CATTGATTAC TCCGAACAGC AGTTATCCTT CATCATTGCG
ACTCCCCCAT TTAGGCAAAC CTCAAATATA GACCAAACAG AGATCCGCGG TTTGGAACTA
GAAACGGTTG TCATGTTAAG CGAAGATCTT AGATTTAATG CTGCATGGGG TTATACCGAC
TCAAAAGTAA AAGACACAGG GCAAAGGGCA CCAGCTACCC CGAAGTATAC TTTGAACCTT
GGGCTCAACT ATCAAAAAGA GCTAGGCAGA GATTGGCTTT TAAATACCCG TTTAGATTAT
CGAGCACAAG GAGATTTTTT TCTTGGAACA ACGCAACAAC CTTTGGAGGT TGGTGCTAAA
CAGTTCGTCA ACCTGAGTGC TGCATTGGAA TGGCAAGATT GGCGATTTAC ACTCTACGGA
GAAAACATCA CCGATGAGTA CAGCACAACC AACGCCTCTT ATGTTAATGG GTTACTGGGT
ACCGTAACAG GCATTATTCG AGCTTATACT CCTGGCCGTC AAATTGGTGC ATCTGTCGAA
TATAAATTCT AA
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| Protein sequence | MKTIYYPILF SISMMPIGML WANAEETEEN IDIQGIEVIQ VTARKRTESL QEIPDAVTAF
SESDIESARI EQVNDFINLT PNVIFRKTFR AGASFITMRG ITGTQQGLPP VTYVVDGVQV
GSADFINQDM GEIERIEVLR GPQGALYGAG AMAGAINVIT KAPTEELSGK IKAQYAEGND
KSVSGYISGG VSENIFGLVS VGARKSDGLI DSSTGEDLDF NDTKRIKTRW QYLGDEFSAD
LRLGYASYEQ GAVMQDLLAK GEEFVDAQKT DLDDFSGSGP ERSFIGKENQ IFKDASIKLD
YDFDNMTFTW ISSYQDAEQD LIGDLDWSSA NIFLQDLVDN FDVTSHEVKL TSNNDSDLRW
LAGAYYQKRN GLNQLRIRLE PTVGVIGDSI FDQVDVKEDT IKAVFAQLNY DITDKLELTL
AGRYDQVDYQ STRFKTPEQQ EIVPLPDANG QLQDTLTESD SSFQPKVSLS YDINSDSMIY
ATYAKGFRPG FYNSGNLTKA ETTQNFEVGG KSTWWNNRVQ INGAIFYIDY SEQQLSFIIA
TPPFRQTSNI DQTEIRGLEL ETVVMLSEDL RFNAAWGYTD SKVKDTGQRA PATPKYTLNL
GLNYQKELGR DWLLNTRLDY RAQGDFFLGT TQQPLEVGAK QFVNLSAALE WQDWRFTLYG
ENITDEYSTT NASYVNGLLG TVTGIIRAYT PGRQIGASVE YKF
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