Gene Swoo_4098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4098 
Symbol 
ID6118448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4978761 
End bp4979135 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content45% 
IMG OID641635659 
ProductTM2 domain-containing protein 
Protein accessionYP_001762449 
Protein GI170728423 
COG category[S] Function unknown 
COG ID[COG2314] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTC GTGACTATCC ACTCTCGCAG CTTAAAGAGT CTCTATGTAC GCAGTGCAGT 
CAAAAGATCG ACTCCAGTTT AGTTACCTGC CCCGAATGCC ATGCAACCCA GGGATTAGAA
GCCCTGGCAG GCGTCGATCC AAACATACAT ATCAAGAACC AAAAGCTCGC AATTTGGTTT
AGCTTTTTGC TGGGAGGACT GGGAATACAC AGGTTCTATT TGGGTCAATA TATGAAGGGC
AGCTTATACC TAGTCTTTAG TTGGACTTTA GTCCCTGTAC TCGTCGGCTG GGTTGACGCA
ATCCGAACTC TGAATATGAG CCCCTTTAAC TTTGCTCAGC GCTACTCAAG AAAAGTAGAG
CGTCATTATA TTTGA
 
Protein sequence
MKTRDYPLSQ LKESLCTQCS QKIDSSLVTC PECHATQGLE ALAGVDPNIH IKNQKLAIWF 
SFLLGGLGIH RFYLGQYMKG SLYLVFSWTL VPVLVGWVDA IRTLNMSPFN FAQRYSRKVE
RHYI