Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4098 |
Symbol | |
ID | 6118448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 4978761 |
End bp | 4979135 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641635659 |
Product | TM2 domain-containing protein |
Protein accession | YP_001762449 |
Protein GI | 170728423 |
COG category | [S] Function unknown |
COG ID | [COG2314] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACTC GTGACTATCC ACTCTCGCAG CTTAAAGAGT CTCTATGTAC GCAGTGCAGT CAAAAGATCG ACTCCAGTTT AGTTACCTGC CCCGAATGCC ATGCAACCCA GGGATTAGAA GCCCTGGCAG GCGTCGATCC AAACATACAT ATCAAGAACC AAAAGCTCGC AATTTGGTTT AGCTTTTTGC TGGGAGGACT GGGAATACAC AGGTTCTATT TGGGTCAATA TATGAAGGGC AGCTTATACC TAGTCTTTAG TTGGACTTTA GTCCCTGTAC TCGTCGGCTG GGTTGACGCA ATCCGAACTC TGAATATGAG CCCCTTTAAC TTTGCTCAGC GCTACTCAAG AAAAGTAGAG CGTCATTATA TTTGA
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Protein sequence | MKTRDYPLSQ LKESLCTQCS QKIDSSLVTC PECHATQGLE ALAGVDPNIH IKNQKLAIWF SFLLGGLGIH RFYLGQYMKG SLYLVFSWTL VPVLVGWVDA IRTLNMSPFN FAQRYSRKVE RHYI
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