| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4092 |
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| Symbol | |
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| ID | 6118442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4969347 |
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| End bp | 4973150 |
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| Gene Length | 3804 bp |
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| Protein Length | 1267 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641635653 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_001762443 |
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| Protein GI | 170728417 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAC AGGTTTTCAC ATATGCGAAT AACTACAATG GCTTTGCTAC AGGTGATGTT
AACGAGCGCA CTGGGTCTTT TGATTTTTCA ATACATCTCG TCAAAATTAA TGCGAACAAA
TTAAAAGGGC CTGAATTAGA GATAAATACA AGCATTGATA CCTTTAATCA ACAGGATCAT
GGCTTTGGTC CTGGGCTAAA ATTAAGCTTA TCAAAAATAG ATTTGATTAA TCATATTTTC
ACTAATTCAA GTGGCGTTTC TATTAAATTA GATATTAGAA ATACTTTACC TGCTGAGCCC
TGTTTAAATG ACTTTAAGAT TGAATACAAC TCAAGAGTAA AAGAGTACAA AGTTAGCTAT
ATAGATGGGC AAAAGGACGT TTTAAAAACT GATGGTCAGG GTAAATTCGC AAATCTAGTG
AGAAAAGAAA ATGCATTAGG GAATGGGGTT AATTTTAGAT GGTCATCAAC CAACCAATTA
ATTGAAATAA AAGACGATTC TGGTTTTATA TTTTTAAGCG TAAAAAAAAT AGGGGCAGGT
GGAGCAAAAG AGGTTGGCCT GCTAGGCGGT AAATACTTTG TGTTCATCAA CTCTAATGAA
AAACTCACCA CGCTTTCTCT ACCTTATGAA AACCAAGGCG CTTACCAAAA TGCATTAACC
TATAAAGTAG TAAAAAAATA CGATGGGAAA AGTAACGTTT ACTGCATTGA TGAGGTGCTT
TTACCCGATG AAACAGCCCA TAAGCTAGTA TATGGTCAAT ATCTATCACT CCCTGCACGC
GCCGGTTTTA CATCACTGCC CGTTGTCACT GAGCATTCGC TAATACGCTC AGGACAGACA
ATCAGGAAGA CCACCTTCGA CTTCCTGCTA GAGGGTAATC AAGGCAATAA TGCTTATGGC
CTAGGCGCTT CTGTGCCCTA TCAAGCCTAT AGCGACACCA TGTATAGAAT AAAAACTCCC
TACTTCTATC GTAGTCAAAA AACCAGTGTC GATCATGAAG GACATTCACT GGTTACAACT
CAAAAGTTTG ATAAGTTCCA TAATATTCGT GAAGCAAAAA TCGAGTATAA GAACTGTATA
ACAACAGAGG AGATAACTTA CTTCTCTACA GACAATGGTG ATATTTCAAA CCAAGATCCA
AGATTAAAGT TGATACAGAA CCATAAGAAA AAATTTTCAA ATAATGGTAA CAGTCGCACT
GAATCAATTT ATTATCAGTT TGATAATTAT GGTAATTTAC TCAATGAGTA TGACCCTGAA
GAGGGTGTCT CAATTACTTA TGAATATTAC AACACCCTTA ATGGTGCGAT AGATAATGCG
ATTGAAAAAT GCCCTAAGTA TGACTTTATT TACTTCCTAA AGTCGCAATC AATAACAGAT
ACTAAAACAG ATGAAGCACG TATCGTTTCT CGTCGAAAAT ATCGTTTACT CCATGATTCG
GTTTGTATTG AAGAAGATAA AAATGAATAT TCACAAACAA AAGTTAACTA CAGCTACTGT
CCAACAGGAG GCGATCTTGG CCGAATAAGT GCCATCATAT TAGAGAGCAA TAACCATCAA
AATAGAGAAG AGAGTCATTA TGAAATCATT GATAACAGGC TAAAGGTAAC GACTACGACA
TCCTGCTCTA GTGAAGCAAA TGACTCCATT AAAAGCTTTA CCCTCTTTAA TATGATATCT
GGTGAGATAG TAGAGAAAAA CGAACAAGGA AGATCCGTTC GTTTGGATTA TTATTTTGAT
GGAAGACTCA AGGCTGAAAT CACAGCTCCA AACTCAGAAT ATGAATGCAA AAAAGAGTAT
ATTTACTTCG ACTCTCAAAG CAAAATTGAA GAGTTCGATT CTTATGGTAA TAAGAAAACG
ACTCAGTATG ACGCACTCGG CCAAGTAAGA GAGGTCTATC TAACCATACC TGGAGTGATA
GAGAACTACC TGAATATAAG CAATGAGTTT AATTCGCTGG GACAGCAAGT AACTGAAACT
CAATATGATA AAACCTTGCC TTCAAACCTT CAGCTACCCA TCGCAGAGCA AACATGGGCA
CTGACCAAAA AATTTGAATA TGATGGCTGG GGAGAGTGTT TCCAAGTCAC CTTACCAGAT
GGTCAAATTC AAATCGATCA ATTTGATCCC ATAAGCTTGA AACAAGTAAC AGGCACTGCA
GGCCAACCCT ATTCAGTTAA CCTACGTGAT CCCTTAAAGC GTCAGGTGAT CACCGAACAG
TTTGATCAAA ACAATCAGAA AATGAACGTT GGAAGTACGA CGGTTTATGA TGGTTTTGGT
CGCATCTGCA ATAGCGTGAA CCACCTTGGT GTCAACCAAG ATTTTGGCCA TGATGTACTC
AATAGGGTGA CTTCAACTAG AGTGCATTAC CTACATAATG CTGACTTTAT CGATTTCACC
ACATCAAAAA TATACTCGCC GTACCATACC AGTATCGACT TTATCGAGTC TGTCTCCCTA
GATAACATAA AATTAGGTCA GCGTAACTTT GATGGCTTTG GTCGCTTAAT GGATGAAACC
ATAGGACAAA CTCAAACAAG TTATCATTAT TCGGCAGGGG CGATACATTT TCATAAAGTA
AAATTGTCAA ACGGACAAGA AGTCGATACA CATTTCAATA GTGAGATTGG CGATTATACT
CAATTGGGTT TGAAGCATTA CATACCAGAT AACTTACGCG GTTCCATCCG TAACGCAGTA
AGGGAGGATA CTGGCAACCA TGTTGATTAC GAATATCGAT TCGATGGCTT AACCTCAATA
GAGAGAAGCC ACTCCGATAC TCAGCACTAT GAGTACACGC TATTTGGCTT TCCAGTTGCT
TCTAAATTCA GCGATACAGA CTATGAGCTT ATCGAATACG ATGATTTTCA GAGAGTAAAA
TCGACCTTCG ATGGAAGTAA TACAGTTAAT TATATGAACT ATGACCAATT TTCTCGTGTA
ACAAAAATCA TAGTCACAGG TGCTAACCCT ATTGAAATAA ACCACGATTA CTCAAAATTT
CCCTATGAGG TCGTGACAAC TAGCACGCAG GAGACAGATC AACTGATTGA AACACGTCAA
TTTACTGATG ACGGTAAAGT TAGAGTAAAG CTCACCAGCC TAAACGGCGA TACCTTAACT
GAACATTTTG AATATGATCC TATTGGACGT TTATCCTCTT ACCAAGCAGA TGGCGCCAGA
AGTCCTAAAG ATCAATATGA AAATACTATA GTAAGTCAGG TGTTTCGTTA TGATAATTTG
AATAACATTC GCCATGTAAC AACCGTTTTT GATGACAGTT CGGTAGATAA CTCTGAGCTT
ATCTATGACA TGAATAACCC CACTCAATTA ATGCGTATTT CACATACCCA TGCCTCATAT
GAAGATGTAG ATTTGAGTCA CGCTTATAAT GAGTTTGGCA AGCTCACTCA AGATGAGAAA
GGCTTACAGT ATTCATATGA TGAATACGGT GAAATGAGGG CTATTTATGA TGAGCATGGC
CTATTAATAT CATCTTATGA ATACGACGCT GTAGGGCGAC TGATAAGCCA ATCGATTAAT
AATGAACCTG ACTTAGAGTT AATCTATTCA GGTAATAAAT TAATAGGTCA AAAACAGGGA
GAGTTAAGAG TACAGCACCT ACTCGCCGAC AATAGACTTA TCGGGAAAAA GTTCAGCAGC
GCTGAAATTC AACTGGTTTC ATCATACCTA ACGGACTCAA GTAACACGCC CATTAGCGTC
TCAAGAAAAG GCGATATCAA CAATACAGAA AACTACCTTT ATACCGCTTA TGGATATAGG
CACCTTCTAG CTCCGCCTTC ATAA
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| Protein sequence | MAEQVFTYAN NYNGFATGDV NERTGSFDFS IHLVKINANK LKGPELEINT SIDTFNQQDH
GFGPGLKLSL SKIDLINHIF TNSSGVSIKL DIRNTLPAEP CLNDFKIEYN SRVKEYKVSY
IDGQKDVLKT DGQGKFANLV RKENALGNGV NFRWSSTNQL IEIKDDSGFI FLSVKKIGAG
GAKEVGLLGG KYFVFINSNE KLTTLSLPYE NQGAYQNALT YKVVKKYDGK SNVYCIDEVL
LPDETAHKLV YGQYLSLPAR AGFTSLPVVT EHSLIRSGQT IRKTTFDFLL EGNQGNNAYG
LGASVPYQAY SDTMYRIKTP YFYRSQKTSV DHEGHSLVTT QKFDKFHNIR EAKIEYKNCI
TTEEITYFST DNGDISNQDP RLKLIQNHKK KFSNNGNSRT ESIYYQFDNY GNLLNEYDPE
EGVSITYEYY NTLNGAIDNA IEKCPKYDFI YFLKSQSITD TKTDEARIVS RRKYRLLHDS
VCIEEDKNEY SQTKVNYSYC PTGGDLGRIS AIILESNNHQ NREESHYEII DNRLKVTTTT
SCSSEANDSI KSFTLFNMIS GEIVEKNEQG RSVRLDYYFD GRLKAEITAP NSEYECKKEY
IYFDSQSKIE EFDSYGNKKT TQYDALGQVR EVYLTIPGVI ENYLNISNEF NSLGQQVTET
QYDKTLPSNL QLPIAEQTWA LTKKFEYDGW GECFQVTLPD GQIQIDQFDP ISLKQVTGTA
GQPYSVNLRD PLKRQVITEQ FDQNNQKMNV GSTTVYDGFG RICNSVNHLG VNQDFGHDVL
NRVTSTRVHY LHNADFIDFT TSKIYSPYHT SIDFIESVSL DNIKLGQRNF DGFGRLMDET
IGQTQTSYHY SAGAIHFHKV KLSNGQEVDT HFNSEIGDYT QLGLKHYIPD NLRGSIRNAV
REDTGNHVDY EYRFDGLTSI ERSHSDTQHY EYTLFGFPVA SKFSDTDYEL IEYDDFQRVK
STFDGSNTVN YMNYDQFSRV TKIIVTGANP IEINHDYSKF PYEVVTTSTQ ETDQLIETRQ
FTDDGKVRVK LTSLNGDTLT EHFEYDPIGR LSSYQADGAR SPKDQYENTI VSQVFRYDNL
NNIRHVTTVF DDSSVDNSEL IYDMNNPTQL MRISHTHASY EDVDLSHAYN EFGKLTQDEK
GLQYSYDEYG EMRAIYDEHG LLISSYEYDA VGRLISQSIN NEPDLELIYS GNKLIGQKQG
ELRVQHLLAD NRLIGKKFSS AEIQLVSSYL TDSSNTPISV SRKGDINNTE NYLYTAYGYR
HLLAPPS
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